RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TUBB6Q9BUF5 446 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
HMGB2-205ENST00000511316 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TCEAL9Q9UHQ7 104 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 KCNG1Q9UIX4 513 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 STARD13Q9Y3M8 1113 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 TRANK1O15050 2925 aa13.55□□□□□ -0.24
HMGB2-205ENST00000511316 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TCP11X1B4DZS4 312 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 PSTPIP1O43586 416 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 LRRN2O75325 713 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 UBOX5O94941 541 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TRIM49P0CI25 452 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TRIM49CP0CI26 452 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 PYGMP11217 842 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 PLS3P13797 630 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 KRT17Q04695 432 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 KCNA1Q09470 495 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 SIX1Q15475 284 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 KRT39Q6A163 491 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 CNKSR3Q6P9H4 555 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.54□□□□□ -0.243e-19■■■■■ 33
HMGB2-205ENST00000511316 TMCO2Q7Z6W1 182 aaPredicted RBP13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TDRPQ86YL5 185 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 KRT35Q92764 455 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 NT5C1BQ96P26 610 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 TAS2R14Q9NYV8 317 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 A0A0C4DFX4 3053 aa13.54□□□□□ -0.24
HMGB2-205ENST00000511316 HIP1RO75146 1068 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 VTNP04004 478 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 BRAFP15056 766 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 MSH2P43246 934 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 GPC3P51654 580 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 GTF2BQ00403 316 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ASRGL1Q7L266 308 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ADAT2Q7Z6V5 191 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 PBX4Q9BYU1 374 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 TMEM8AQ9HCN3 771 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 XPNPEP1Q9NQW7 623 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ABHD14A-ACY1A0A1B0GW23 586 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 UNC5CO95185 931 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ANP32DO95626 131 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 IFNAR2P48551 515 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 RARRES1P49788 294 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 DEFB103AP81534 67 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 GCNT1Q02742 428 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 E2F5Q15329 346 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 CCNG2Q16589 344 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 KIZQ2M2Z5 673 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 IER5Q5VY09 327 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 CCDC25Q86WR0 208 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 PSPC1Q8WXF1 523 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 TTYH1Q9H313 450 aaPredicted RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 C17orf75Q9HAS0 396 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 KCNK9Q9NPC2 374 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
HMGB2-205ENST00000511316 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
HMGB2-205ENST00000511316 VCANP13611 3396 aa13.52□□□□□ -0.24
HMGB2-205ENST00000511316 PTPRSQ13332 1948 aa13.52□□□□□ -0.24
HMGB2-205ENST00000511316 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 TMEM110-MUSTN1A8MSY1 372 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 H0YCG3 227 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■■■□ 20.1
HMGB2-205ENST00000511316 BAIAP3O94812 1187 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 MYOGP15173 224 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
HMGB2-205ENST00000511316 NAA25Q14CX7 972 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms