RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 CLDN5O00501 218 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 TADA3O75528 432 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 CDC25CP30307 473 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 GPC5P78333 572 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 CCDC40Q4G0X9 1142 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 WDR44Q5JSH3 913 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 SCN4BQ8IWT1 228 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 UBR7Q8N806 425 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ZSCAN18Q8TBC5 510 aaPredicted RBP12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ELSPBP1Q96BH3 223 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 RSPRY1Q96DX4 576 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ARID3AQ99856 593 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 TTLL2Q9BWV7 592 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ATXN3LQ9H3M9 355 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 TASP1Q9H6P5 420 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 CSNK1G1Q9HCP0 422 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 NCANO14594 1321 aa12.5□□□□□ -0.41
HMGXB3-203ENST00000510472 F8VP50 259 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 TNFRSF10BO14763 440 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 TRIM66O15016 1216 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 FGFR1OPO95684 399 aaKnown RBP12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 GRIK1P39086 918 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 VIPR2P41587 438 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 USP46P62068 366 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 ORC1Q13415 861 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM35AQ86V20 835 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 ARID3BQ8IVW6 561 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 TTC39CQ8N584 583 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 KCNK16Q96T55 309 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 KXD1Q9BQD3 176 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 ZMYM5Q9UJ78 669 aa12.49□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM92AA1XBS5 289 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 KRBA1A5PL33 1030 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 MBD3O95983 291 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 PDGFBP01127 241 aaPredicted RBP12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 CCDC130P13994 396 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 NPR3P17342 541 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 RAD23BP54727 409 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 CYP4F8P98187 520 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 CUL2Q13617 745 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 TAF12Q16514 161 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 IER5LQ5T953 404 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 VITQ6UXI7 678 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 DENND5BQ6ZUT9 1274 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 MON1AQ86VX9 555 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 SMOQ99835 787 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 UXTQ9UBK9 157 aaPredicted RBP12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGXB3-203ENST00000510472 SHISA7A6NL88 538 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 HHLA1C9JL84 531 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 ARNTLO00327 626 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 BEST1O76090 585 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 PRAMEF12O95522 483 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 CD58P19256 250 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 ACO1P21399 889 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 DDX6P26196 483 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 FCHO2Q0JRZ9 810 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 ARHGAP15Q53QZ3 475 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 TXNDC8Q6A555 127 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 CMTM8Q8IZV2 173 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 FBXL6Q8N531 539 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 SLC4A11Q8NBS3 891 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 E2F7Q96AV8 911 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 THAP9Q9H5L6 903 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 FAM49BQ9NUQ9 324 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 GCNT4Q9P109 453 aa12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
HMGXB3-203ENST00000510472 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 AP1G2O75843 785 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 CFHP08603 1231 aa12.46□□□□□ -0.41
HMGXB3-203ENST00000510472 PSMC3P17980 439 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms