RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 RIN3Q8TB24 985 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 PARD3BQ8TEW8 1205 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 CLDN23Q96B33 292 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 TRMT2BQ96GJ1 504 aaKnown RBP11□□□□□ -0.65
PFDN1-203ENST00000510217 MMS19Q96T76 1030 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 SLC46A2Q9BY10 475 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 BCO2Q9BYV7 579 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
PFDN1-203ENST00000510217 CLSTN2Q9H4D0 955 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 MAGED2Q9UNF1 606 aaPredicted RBP11□□□□□ -0.65
PFDN1-203ENST00000510217 PIAS3Q9Y6X2 628 aa11□□□□□ -0.65
PFDN1-203ENST00000510217 SLC38A8A6NNN8 435 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 ZNF202O95125 648 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 VNN1O95497 513 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 CAVIN2O95810 425 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
PFDN1-203ENST00000510217 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
PFDN1-203ENST00000510217 PDGFRBP09619 1106 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 DDX6P26196 483 aaKnown RBP eCLIP10.99□□□□□ -0.656e-11■■■■■ 165.9
PFDN1-203ENST00000510217 ATICP31939 592 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
PFDN1-203ENST00000510217 DLG4P78352 724 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 TRPC3Q13507 836 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 MDH1BQ5I0G3 518 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 C4orf50Q6ZRC1 276 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 YAF2Q8IY57 180 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 CMTM8Q8IZV2 173 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 MAB21L3Q8N8X9 362 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 BPIFB1Q8TDL5 484 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 ELMO3Q96BJ8 720 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 PCED1BQ96HM7 432 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 ZFYVE19Q96K21 471 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 MYRFLQ96LU7 910 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 SNX25Q9H3E2 840 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 DPEP3Q9H4B8 488 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 SMYD3Q9H7B4 428 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 ZMYM5Q9UJ78 669 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 NDRG2Q9UN36 371 aaKnown RBP10.99□□□□□ -0.65
PFDN1-203ENST00000510217 TRAF3IP3Q9Y228 551 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 CCL26Q9Y258 94 aa10.99□□□□□ -0.65
PFDN1-203ENST00000510217 MRPS17Q9Y2R5 130 aaKnown RBP10.99□□□□□ -0.65
PFDN1-203ENST00000510217 MAN2B1O00754 1011 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 DPYSL4O14531 572 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SP9P0CG40 484 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 BDNFP23560 247 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 RAP1GAPP47736 663 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SOX9P48436 509 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 AP3M2P53677 418 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 CACNA2D1P54289 1103 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 BIRC3Q13489 604 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 NCOA4Q13772 614 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 KCNB1Q14721 858 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 MAPRE1Q15691 268 aaKnown RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 NFIL3Q16649 462 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 ZNF699Q32M78 642 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 ZCWPW2Q504Y3 356 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 ARHGAP29Q52LW3 1261 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 WDR44Q5JSH3 913 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 C1orf220Q5T0J3 134 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 TXNDC8Q6A555 127 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 CELF5Q8N6W0 485 aaKnown RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 OR6B3Q8NGW1 331 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 MYCBPAPQ8TBZ2 947 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 CSGALNACT1Q8TDX6 532 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 FAM3CQ92520 227 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 USP13Q92995 863 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 NKD2Q969F2 451 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 MSANTD3Q96H12 275 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 NELL2Q99435 816 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 PRMT8Q9NR22 394 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 TMEM30AQ9NV96 361 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SPATA6Q9NWH7 488 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 MAGEC2Q9UBF1 373 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 UXTQ9UBK9 157 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 NXF1Q9UBU9 619 aaKnown RBP10.98□□□□□ -0.65
PFDN1-203ENST00000510217 MAPK8IP1Q9UQF2 711 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 R4GN57 208 aa10.98□□□□□ -0.65
PFDN1-203ENST00000510217 SOBPA7XYQ1 873 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 SPECC1L-ADORA2AF8WAN1 911 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 TRIM66O15016 1216 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 NCAM2O15394 837 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 LAMTOR5O43504 91 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 PHACTR2O75167 634 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 AKAP3O75969 853 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 KIF20AO95235 890 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 FAM163BP0C2L3 166 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 NR2F2P24468 414 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 CCNE1P24864 410 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 CTHP32929 405 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 GNL1P36915 607 aaPredicted RBP10.97□□□□□ -0.65
PFDN1-203ENST00000510217 AVPR1AP37288 418 aa10.97□□□□□ -0.65
PFDN1-203ENST00000510217 MLLT6P55198 1093 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms