RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 COQ4Q9Y3A0 265 aa14.45□□□□□ -0.1
SNF8-206ENST00000509989 ASB3Q9Y575 518 aa14.45□□□□□ -0.1
SNF8-206ENST00000509989 SHISA7A6NL88 538 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 PRR33A8MZF0 331 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 ZNF197O14709 1029 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 PI15O43692 258 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 FAM163BP0C2L3 166 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 GRIK1P39086 918 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 MAGEA11P43364 429 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 PGFP49763 221 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 INCA1Q0VD86 236 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 SMARCB1Q12824 385 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 TXNDC8Q6A555 127 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 ARHGEF19Q8IW93 802 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 PBXIP1Q96AQ6 731 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 FUBP3Q96I24 572 aaKnown RBP eCLIP14.44□□□□□ -0.1
SNF8-206ENST00000509989 GBP4Q96PP9 640 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 CYP2S1Q96SQ9 504 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 SMOQ99835 787 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 NIF3L1Q9GZT8 377 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 GDE1Q9NZC3 331 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 RWDD2AQ9UIY3 292 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 CCL26Q9Y258 94 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 ZFP37Q9Y6Q3 630 aaPredicted RBP14.44□□□□□ -0.1
SNF8-206ENST00000509989 MIA3Q5JRA6 1907 aa14.44□□□□□ -0.1
SNF8-206ENST00000509989 MYOFQ9NZM1 2061 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 BICDL2A1A5D9 508 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 CILPO75339 1184 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 MICAL2O94851 1124 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 SRFP11831 508 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 COL9A1P20849 921 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 ADORA2BP29275 332 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 RPL10AP62906 217 aaKnown RBP14.43□□□□□ -0.1
SNF8-206ENST00000509989 IFRD2Q12894 506 aaPredicted RBP14.43□□□□□ -0.1
SNF8-206ENST00000509989 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 CWF19L1Q69YN2 538 aaKnown RBP14.43□□□□□ -0.1
SNF8-206ENST00000509989 C4orf50Q6ZRC1 276 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 GPRIN1Q7Z2K8 1008 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 ITIH5Q86UX2 942 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 ARID3BQ8IVW6 561 aaPredicted RBP14.43□□□□□ -0.1
SNF8-206ENST00000509989 UBALD2Q8IYN6 164 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 SIX5Q8N196 739 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 UBR7Q8N806 425 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 MAB21L3Q8N8X9 362 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 SCAMP5Q8TAC9 235 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 SLC2A14Q8TDB8 520 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 SMARCD2Q92925 531 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 MED10Q9BTT4 135 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
SNF8-206ENST00000509989 SLITRK6Q9H5Y7 841 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 WDFY4Q6ZS81 3184 aa14.43□□□□□ -0.1
SNF8-206ENST00000509989 HEPACAM2A8MVW5 462 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 ECI2O75521 394 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 CSH1P0DML2 217 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 CSH2P0DML3 217 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 PPP1R2P41236 205 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 RAD23BP54727 409 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 MARSP56192 900 aaKnown RBP14.42□□□□□ -0.1
SNF8-206ENST00000509989 KCNH2Q12809 1159 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 TAF12Q16514 161 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 RBM43Q6ZSC3 357 aaKnown RBP14.42□□□□□ -0.1
SNF8-206ENST00000509989 C11orf57Q6ZUT1 292 aaPredicted RBP14.42□□□□□ -0.1
SNF8-206ENST00000509989 MTSS1LQ765P7 747 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 CREBRFQ8IUR6 639 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 TMEM105Q8N8V8 129 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 SLC4A11Q8NBS3 891 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 LEMD2Q8NC56 503 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 JAKMIP2Q96AA8 810 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 ELSPBP1Q96BH3 223 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 ZFYVE19Q96K21 471 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
SNF8-206ENST00000509989 MYRFLQ96LU7 910 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 KRT82Q9NSB4 513 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 ATG2BQ96BY7 2078 aa14.42□□□□□ -0.1
SNF8-206ENST00000509989 HHLA1C9JL84 531 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 RNF225M0QZC1 329 aaPredicted RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 TNFRSF10BO14763 440 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 CD72P21854 359 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 ZXDBP98169 803 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 PPP1R26Q5T8A7 1209 aaPredicted RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 GJB7Q6PEY0 223 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 VSTM1Q6UX27 236 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 MLKLQ8NB16 471 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 TTC8Q8TAM2 541 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 TRMT2BQ96GJ1 504 aaKnown RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 SPATA17Q96L03 361 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 C8orf48Q96LL4 319 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 ZSWIM1Q9BR11 485 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 IMPG2Q9BZV3 1241 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 TASP1Q9H6P5 420 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 CYP3A43Q9HB55 503 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 METTL14Q9HCE5 456 aaKnown RBP14.41□□□□□ -0.1
SNF8-206ENST00000509989 ZFP14Q9HCL3 533 aa14.41□□□□□ -0.1
SNF8-206ENST00000509989 SLC2A4RGQ9NR83 387 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms