RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MRPS17Q9Y2R5 130 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 CLDN5O00501 218 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 MAN2B1O00754 1011 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 TACC1O75410 805 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 KIF20AO95235 890 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 TRIM49P0CI25 452 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 TRIM49CP0CI26 452 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 ANXA13P27216 316 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 ATICP31939 592 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 IFRD2Q12894 506 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 ORC1Q13415 861 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 MAPRE1Q15691 268 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 ZNF667Q5HYK9 610 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 FMR1NBQ8N0W7 255 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 CELF5Q8N6W0 485 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 MYCBPAPQ8TBZ2 947 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 OSBPL6Q9BZF3 934 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 SDCBP2Q9H190 292 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 UXTQ9UBK9 157 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 TRAF3IP3Q9Y228 551 aa15.8■□□□□ 0.12
UBE2D3-228ENST00000508974 NCAM2O15394 837 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 LAMTOR5O43504 91 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 AKAP3O75969 853 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 STAU1O95793 577 aaKnown RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 SP9P0CG40 484 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 PIK3CAP42336 1068 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 MAGEA11P43364 429 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 VAMP7P51809 220 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 AP3M2P53677 418 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 CACNA2D1P54289 1103 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 USP46P62068 366 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 CLDN10P78369 228 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 KCNB1Q14721 858 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 ARHGAP29Q52LW3 1261 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 TRIM68Q6AZZ1 485 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 SPOPLQ6IQ16 392 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 TSSK4Q6SA08 328 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 MAML2Q8IZL2 1156 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 GUF1Q8N442 669 aaKnown RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 B3GALNT2Q8NCR0 500 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 USP13Q92995 863 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 TRMT2BQ96GJ1 504 aaKnown RBP15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 SLC22A12Q96S37 553 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 CYP2S1Q96SQ9 504 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 NELL2Q99435 816 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 TRPV5Q9NQA5 729 aa15.79■□□□□ 0.12
UBE2D3-228ENST00000508974 FANCMQ8IYD8 2048 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 C2orf78A6NCI8 922 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 PRR23AA6NEV1 266 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 PROB1E7EW31 1015 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 F8VP50 259 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 SPECC1L-ADORA2AF8WAN1 911 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 CKMP06732 381 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 DDX6P26196 483 aaKnown RBP eCLIP15.78■□□□□ 0.123e-8■□□□□ 10.6
UBE2D3-228ENST00000508974 GCLMP48507 274 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 FZD5Q13467 585 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 C1orf220Q5T0J3 134 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 MON1AQ86VX9 555 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 FAM186BQ8IYM0 893 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 RIN3Q8TB24 985 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 TMC2Q8TDI7 906 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 MED10Q9BTT4 135 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 LMAN1LQ9HAT1 526 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 GKN1Q9NS71 199 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 RBM12Q9NTZ6 932 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 TDP1Q9NUW8 608 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 TMEM30AQ9NV96 361 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 THG1LQ9NWX6 298 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 OBP2AQ9NY56 170 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 MYO16Q9Y6X6 1858 aa15.78■□□□□ 0.12
UBE2D3-228ENST00000508974 TRIM66O15016 1216 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ABL1P00519 1130 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 HLA-DRAP01903 254 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 KRT13P13646 458 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 WEE1P30291 646 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 MTAPQ13126 283 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ADAM9Q13443 819 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 PON2Q15165 354 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ZACNQ401N2 412 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 DENND5BQ6ZUT9 1274 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ACOT1Q86TX2 421 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ZNF687Q8N1G0 1237 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 ARL14EPQ8N8R7 260 aaPredicted RBP15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 TMEM174Q8WUU8 243 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 CLDN23Q96B33 292 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 EBF3Q9H4W6 596 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.12
UBE2D3-228ENST00000508974 F5P12259 2224 aa15.76■□□□□ 0.11
UBE2D3-228ENST00000508974 TRAV19A0A0A6YYK7 116 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms