RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 U2AF1Q01081 240 aaKnown RBP eCLIP6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 GAS2L3Q86XJ1 694 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 MAGEB6Q8N7X4 407 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 MAML1Q92585 1016 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 GLG1Q92896 1179 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 REPS1Q96D71 796 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 C22orf23Q9BZE7 217 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 GLOD4Q9HC38 313 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 CAPN8A6NHC0 703 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 TARM1B6A8C7 271 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 FAM227AF5H4B4 570 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 CYP2C18P33260 490 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 MINDY4Q4G0A6 757 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 AARS2Q5JTZ9 985 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 WDR53Q7Z5U6 358 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 JDP2Q8WYK2 163 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 TBC1D5Q92609 795 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 ANKS1AQ92625 1134 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 PUS7Q96PZ0 661 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 DUSP22Q9NRW4 184 aa6.57□□□□□ -1.36
TOPBP1-206ENST00000508524 A1L4Q6 167 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 A6NNZ2 444 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 TMEM233B4DJY2 109 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 MYO1FO00160 1098 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 TBX3O15119 743 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 PRKCGP05129 697 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 FAM163BP0C2L3 166 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 PDE6CP51160 858 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 DGKEP52429 567 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 EEFSECP57772 596 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 SLC13A2Q13183 592 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 CEP85Q6P2H3 762 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 SLC15A3Q8IY34 581 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 R3HDM4Q96D70 268 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 C1orf112Q9NSG2 853 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 L1RE1Q9UN81 338 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 NACADO15069 1562 aa6.56□□□□□ -1.36
TOPBP1-206ENST00000508524 USP19O94966 1318 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 KCNA3P22001 575 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 ADORA2AP29274 412 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SLC7A1P30825 629 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SATB1Q01826 763 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 KRT17Q04695 432 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 CNN3Q15417 329 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 MGAT5BQ3V5L5 792 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 PLA1AQ53H76 456 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 DEPDC1Q5TB30 811 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 APOA5Q6Q788 366 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SLC29A4Q7RTT9 530 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 LRRC71Q8N4P6 559 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 SOCS4Q8WXH5 440 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 MS4A7Q9GZW8 240 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 STK32BQ9NY57 414 aa6.55□□□□□ -1.36
TOPBP1-206ENST00000508524 TSPAN6O43657 245 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 JTBO76095 146 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 ENGP17813 658 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 RAB32Q13637 225 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 ZNF782Q6ZMW2 699 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 ZNF804AQ7Z570 1209 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 MPP5Q8N3R9 675 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 RP9Q8TA86 221 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 RAPGEF4Q8WZA2 1011 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 DDB2Q92466 427 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 FSD1LQ9BXM9 530 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 SH3BP4Q9P0V3 963 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 SNX14Q9Y5W7 946 aa6.54□□□□□ -1.36
TOPBP1-206ENST00000508524 QSOX1O00391 747 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 FRS3O43559 492 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 TBC1D4O60343 1298 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 TJP3O95049 919 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 NHLRC4P0CG21 123 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 PDE1AP54750 535 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 SRSF4Q08170 494 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 MLC1Q15049 377 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 LLGL1Q15334 1064 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 TMEM119Q4V9L6 283 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 DCAF12L1Q5VU92 463 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 Q6ZWC4 215 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 MICU3Q86XE3 530 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 ABRAQ8N0Z2 381 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 OR56A3Q8NH54 315 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 BPIFB1Q8TDL5 484 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 OSCP1Q8WVF1 389 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 ZNF518BQ9C0D4 1074 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 DDX20Q9UHI6 824 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 GABRQQ9UN88 632 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 ADAMTS5Q9UNA0 930 aa6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 COL3A1P02461 1466 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-206ENST00000508524 INO80B-WBP1J3KQ70 363 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 CTGFP29279 349 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 CYP4F2P78329 520 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 LY6KQ17RY6 165 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 ARHGAP29Q52LW3 1261 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 PCID2Q5JVF3 399 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms