RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 TMEM30AQ9NV96 361 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 INTS13Q9NVM9 706 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 KBTBD4Q9NVX7 518 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 GCNT4Q9P109 453 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 TFIP11Q9UBB9 837 aaKnown RBP6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 ITGA11Q9UKX5 1188 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 EXOC7Q9UPT5 735 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 SNX9Q9Y5X1 595 aa6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 HELZP42694 1942 aaKnown RBP6.91□□□□□ -1.3
HMGN1P16-201ENST00000508308 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 DCDC2BA2VCK2 349 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 C2orf78A6NCI8 922 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SOBPA7XYQ1 873 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TGFB1I1O43294 461 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 STX6O43752 255 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 GDF9O60383 454 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 HUS1O60921 280 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 LDHAP00338 332 aaKnown RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CST3P01034 146 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 EGFP01133 1207 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 RETP07949 1114 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CASP1P29466 404 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 PXNP49023 591 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 GALK1P51570 392 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CACNA2D1P54289 1103 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 USP46P62068 366 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 PSMC1P62191 440 aaKnown RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 RBP5P82980 135 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TSPY1Q01534 308 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 LMNB2Q03252 620 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 EHHADHQ08426 723 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SIM2Q14190 667 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF268Q14587 947 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF77Q15935 545 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 NFE2Q16621 373 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CFAP221Q4G0U5 840 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 C1orf228Q6PIY5 440 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SHC4Q6S5L8 630 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ADGRF2Q8IZF7 708 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SYCP3Q8IZU3 236 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ABCA7Q8IZY2 2146 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TMEM86AQ8N2M4 240 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 GPD1LQ8N335 351 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SYNPOQ8N3V7 929 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 FAM160A2Q8N612 972 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 GPR161Q8N6U8 529 aaKnown RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TMC2Q8TDI7 906 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 CACTINQ8WUQ7 758 aaKnown RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF516Q92618 1163 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 HPDLQ96IR7 371 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ZNF560Q96MR9 790 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 TRIM9Q9C026 710 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 LINC00597Q9H2U6 94 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 SEMA4GQ9NTN9 838 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 THG1LQ9NWX6 298 aaKnown RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 USP18Q9UMW8 372 aa6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 MAGED2Q9UNF1 606 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P16-201ENST00000508308 ASPMQ8IZT6 3477 aa6.9□□□□□ -1.31
HMGN1P16-201ENST00000508308 AKAP13Q12802 2813 aa6.9□□□□□ -1.31
HMGN1P16-201ENST00000508308 PRR5-ARHGAP8B1AHC4 643 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 SPTLC2O15270 562 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 LRP3O75074 770 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 RNF40O75150 1001 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 KRT19P08727 400 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 CSH1P0DML2 217 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 CSH2P0DML3 217 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 WARSP23381 471 aaKnown RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 DDX6P26196 483 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 CNR2P34972 360 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 GJA4P35212 333 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 AVPR1AP37288 418 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 TXLNAP40222 546 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 MAGEA11P43364 429 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 LHX1P48742 406 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 RPL10AP62906 217 aaKnown RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ARHGAP8P85298 464 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 MYL7Q01449 175 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 MESP2Q0VG99 397 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 USP4Q13107 963 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ALCAMQ13740 583 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 PPP2R5DQ14738 602 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 TAF12Q16514 161 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 CSRP2Q16527 193 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 EML3Q32P44 896 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 TRAPPC11Q7Z392 1133 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 WDR5BQ86VZ2 330 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ARL14EPQ8N8R7 260 aaPredicted RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 SPATA18Q8TC71 538 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 PLEKHO2Q8TD55 490 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 NOC3LQ8WTT2 800 aaKnown RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 SCFD1Q8WVM8 642 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 MRPS31Q92665 395 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms