RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SMRP1Q8NCR6 262 aa5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 DDX17Q92841 729 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 FAM118BQ9BPY3 351 aa5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 THAP7Q9BT49 309 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 SERTAD3Q9UJW9 196 aa5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 ZDHHC8Q9ULC8 765 aa5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 NOP58Q9Y2X3 529 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
TRAPPC13-209ENST00000508304 LRRC14BA6NHZ5 514 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 CHRM5P08912 532 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 PDE1AP54750 535 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 PTPN21Q16825 1174 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 UAP1L1Q3KQV9 507 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 CERKLQ49MI3 558 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 Q6ZWC4 215 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 NOL8Q76FK4 1167 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 TEKT5Q96M29 485 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
TRAPPC13-209ENST00000508304 M0QYG6 137 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 GABRDO14764 452 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 MARCH6O60337 910 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 USP1O94782 785 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 TMEM191BP0C7N4 346 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 PPIFP30405 207 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 PCBP2Q15366 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 MEX3CQ5U5Q3 659 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 FAM160B1Q5W0V3 765 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 MIER2Q8N344 545 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 C3orf20Q8ND61 904 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 FAM46DQ8NEK8 389 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 ATG4AQ8WYN0 398 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 GLG1Q92896 1179 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 SLC46A1Q96NT5 459 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 METTL14Q9HCE5 456 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 HESX1Q9UBX0 185 aa5.44□□□□□ -1.54
TRAPPC13-209ENST00000508304 DCLK1O15075 740 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 OAZ2O95190 189 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 GNAI2P04899 355 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 PIM1P11309 404 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 PRF1P14222 555 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 THBS3P49746 956 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 LOXL3P58215 753 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 RBMS2Q15434 407 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 TRIM71Q2Q1W2 868 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 DLK2Q6UY11 383 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 ZNF813Q6ZN06 617 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 TERB1Q8NA31 727 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 GPATCH3Q96I76 525 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 SNX18Q96RF0 628 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 SMAD5Q99717 465 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 SLC13A1Q9BZW2 595 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 GLOD4Q9HC38 313 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 PCDH12Q9NPG4 1184 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 GABRQQ9UN88 632 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 POLHQ9Y253 713 aa5.43□□□□□ -1.54
TRAPPC13-209ENST00000508304 A1L4Q6 167 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 FZD9O00144 591 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 ERC2O15083 957 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 DTNBO60941 627 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 SNUPNO95149 360 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 ARIH2O95376 493 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 EVA1CP58658 441 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 GPSM2P81274 684 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 TBC1D25Q3MII6 688 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 ABHD11Q8NFV4 315 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 TNPO1Q92973 898 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 R3HDM4Q96D70 268 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 PTDSS2Q9BVG9 487 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 MRPL46Q9H2W6 279 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 WDCPQ9H6R7 721 aa5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-209ENST00000508304 ADAM10O14672 748 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 EXOC3O60645 756 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 PDE8BO95263 885 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 ATXN1LP0C7T5 689 aaKnown RBP5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 SCP2P22307 547 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 RECQLP46063 649 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 TPTEP56180 551 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 NANOS2P60321 138 aaKnown RBP5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 THEMIS2Q5TEJ8 643 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 ARHGAP40Q5TG30 622 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 TTYH3Q9C0H2 523 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 HOMER2Q9NSB8 354 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 PCDHA3Q9Y5H8 950 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 WASHC2CQ9Y4E1 1318 aa5.41□□□□□ -1.54
TRAPPC13-209ENST00000508304 UBE2Q2LH0YL09 131 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 DSCR3O14972 297 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 ALPLP05186 524 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 RENBPP51606 427 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 ZNF268Q14587 947 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 LEXMQ3ZCV2 418 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 LONRF3Q496Y0 759 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 MTHFD1LQ6UB35 978 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 LAYNQ6UX15 382 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 XAGE5Q8WWM1 108 aa5.4□□□□□ -1.54
TRAPPC13-209ENST00000508304 LENG8Q96PV6 779 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms