RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CHST15Q7LFX5 561 aaPredicted RBP6.23□□□□□ -1.41
DHFR-204ENST00000508282 MPP5Q8N3R9 675 aa6.23□□□□□ -1.41
DHFR-204ENST00000508282 FAM156AQ8NDB6 213 aa6.23□□□□□ -1.41
DHFR-204ENST00000508282 TTC8Q8TAM2 541 aa6.23□□□□□ -1.41
DHFR-204ENST00000508282 RAPGEF4Q8WZA2 1011 aa6.23□□□□□ -1.41
DHFR-204ENST00000508282 GOLGA6CA6NDK9 693 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GOLGA6BA6NDN3 693 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 FESP07332 822 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GOLGA6DP0CG33 693 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 ZNF37AP17032 561 aaPredicted RBP6.22□□□□□ -1.41
DHFR-204ENST00000508282 KCNA3P22001 575 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 ALDH9A1P49189 494 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 RAB32Q13637 225 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GALEQ14376 348 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GBX1Q14549 363 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GFOD2Q3B7J2 385 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 MGAT5BQ3V5L5 792 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 PLA1AQ53H76 456 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 MICU3Q86XE3 530 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 SLC15A3Q8IY34 581 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GLG1Q92896 1179 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 PUS7Q96PZ0 661 aaKnown RBP6.22□□□□□ -1.41
DHFR-204ENST00000508282 ZNF518BQ9C0D4 1074 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 BHMT2Q9H2M3 363 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 GOLGA6AQ9NYA3 693 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 DLL3Q9NYJ7 618 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 TPCN1Q9ULQ1 816 aa6.22□□□□□ -1.41
DHFR-204ENST00000508282 A1L4Q6 167 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 TRIM43BA6NCK2 446 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 ISM1B1AKI9 464 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 H0YIZ8 118 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 TPP1O14773 563 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 PPM1GO15355 546 aaPredicted RBP6.21□□□□□ -1.42
DHFR-204ENST00000508282 MARCH6O60337 910 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 HRGP04196 525 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 NDUFB7P17568 137 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 ADORA2AP29274 412 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 PDE6CP51160 858 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 MRPS21P82921 87 aaKnown RBP6.21□□□□□ -1.42
DHFR-204ENST00000508282 SATB1Q01826 763 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 KRT17Q04695 432 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 DEPDC1Q5TB30 811 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 RNF220Q5VTB9 566 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 ZDHHC24Q6UX98 284 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 ZNF788Q6ZQV5 615 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 CCDC149Q6ZUS6 474 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 SRGAP1Q7Z6B7 1085 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 OR56A3Q8NH54 315 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 TRIM43Q96BQ3 446 aaPredicted RBP6.21□□□□□ -1.42
DHFR-204ENST00000508282 SUCLG2Q96I99 432 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 GLOD4Q9HC38 313 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 OBP2AQ9NY56 170 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 SH2B3Q9UQQ2 575 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 TBC1D30Q9Y2I9 924 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 WNT6Q9Y6F9 365 aa6.21□□□□□ -1.42
DHFR-204ENST00000508282 ZNF213O14771 459 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 ONECUT2O95948 504 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 ZBED1O96006 694 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 HNRNPCP07910 306 aaKnown RBP eCLIP6.2□□□□□ -1.42
DHFR-204ENST00000508282 BRAFP15056 766 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 CACNB3P54284 484 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 CNGA2Q16280 664 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 CYB5RLQ6IPT4 315 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 ANKRD16Q6P6B7 361 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 BPIFB1Q8TDL5 484 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 LRTOMTQ8WZ04 291 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 R3HDM4Q96D70 268 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 A1CFQ9NQ94 594 aaKnown RBP6.2□□□□□ -1.42
DHFR-204ENST00000508282 SACM1LQ9NTJ5 587 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 AOX1Q06278 1338 aa6.2□□□□□ -1.42
DHFR-204ENST00000508282 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
DHFR-204ENST00000508282 WIPF3A6NGB9 483 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 CYP2C18P33260 490 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 FMO1Q01740 532 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 LY6KQ17RY6 165 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 KIAA0753Q2KHM9 967 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 SLC44A4Q53GD3 710 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 C3orf38Q5JPI3 329 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 FCRLBQ6BAA4 426 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 WDR53Q7Z5U6 358 aaPredicted RBP6.19□□□□□ -1.42
DHFR-204ENST00000508282 FMNL3Q8IVF7 1028 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 WDR75Q8IWA0 830 aaKnown RBP6.19□□□□□ -1.42
DHFR-204ENST00000508282 ABRAQ8N0Z2 381 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 OSCP1Q8WVF1 389 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 NMD3Q96D46 503 aaKnown RBP6.19□□□□□ -1.42
DHFR-204ENST00000508282 DUSP22Q9NRW4 184 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 SERGEFQ9UGK8 458 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 AFF4Q9UHB7 1163 aaKnown RBP6.19□□□□□ -1.42
DHFR-204ENST00000508282 PADI4Q9UM07 663 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 SNX14Q9Y5W7 946 aa6.19□□□□□ -1.42
DHFR-204ENST00000508282 PYCARD-AS1I3L0S3 204 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 GOLIM4O00461 696 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 MYF5P13349 255 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 ENGP17813 658 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 ATF3P18847 181 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 PRKAG1P54619 331 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 PDE1AP54750 535 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 EEFSECP57772 596 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms