RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 SMARCD1Q96GM5 515 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 C8orf48Q96LL4 319 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 SLITRK1Q96PX8 696 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 NT5C1AQ9BXI3 368 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 IRF2BPLQ9H1B7 796 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 CLSTN2Q9H4D0 955 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 TRPC7Q9HCX4 862 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 TRPM5Q9NZQ8 1165 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 MRPS17Q9Y2R5 130 aaKnown RBP16.63■□□□□ 0.25
COL1A1-211ENST00000507689 ARIH1Q9Y4X5 557 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-211ENST00000507689 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 TRAV19A0A0A6YYK7 116 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 F8VP50 259 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MOSPD3O75425 235 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 RTN3O95197 1032 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 CD58P19256 250 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 GDI1P31150 447 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 VIPR2P41587 438 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 ASPAP45381 313 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 PPP3CCP48454 512 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 STX17P56962 302 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 GRM2Q14416 872 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MLF2Q15773 248 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 SLC44A4Q53GD3 710 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 CC2D1AQ6P1N0 951 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MFSD6LQ8IWD5 586 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 ZC3H3Q8IXZ2 948 aaKnown RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 CELF5Q8N6W0 485 aaKnown RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MAB21L3Q8N8X9 362 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MLKLQ8NB16 471 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 MYRFLQ96LU7 910 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 TBC1D17Q9HA65 648 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 DMAP1Q9NPF5 467 aaPredicted RBP16.62■□□□□ 0.25
COL1A1-211ENST00000507689 OBP2AQ9NY56 170 aa16.62■□□□□ 0.25
COL1A1-211ENST00000507689 NCAM2O15394 837 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 ABL1P00519 1130 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 PDGFBP01127 241 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-211ENST00000507689 HMGA1P17096 107 aaKnown RBP16.61■□□□□ 0.25
COL1A1-211ENST00000507689 SLC8A3P57103 927 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 IFRD2Q12894 506 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-211ENST00000507689 CCDC142Q17RM4 750 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 STXBP5Q5T5C0 1151 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 TTI2Q6NXR4 508 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 CLEC17AQ6ZS10 378 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 CMTM8Q8IZV2 173 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 B3GNT5Q9BYG0 378 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 BCO2Q9BYV7 579 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 IL21Q9HBE4 155 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 RWDD2AQ9UIY3 292 aa16.61■□□□□ 0.25
COL1A1-211ENST00000507689 DOCK8Q8NF50 2099 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 MAN2B1O00754 1011 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 AP1G2O75843 785 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 F11P03951 625 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 CKMP06732 381 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 FAM200BP0CF97 657 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 FCARP24071 287 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 TBXAS1P24557 533 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-211ENST00000507689 WEE1P30291 646 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 ARHGAP29Q52LW3 1261 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 VITQ6UXI7 678 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 ZNF852Q6ZMS4 543 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 FAM35AQ86V20 835 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 MON1AQ86VX9 555 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 NUP93Q8N1F7 819 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 CRYBG2Q8N1P7 616 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 STKLD1Q8NE28 680 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 BPIFB1Q8TDL5 484 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 HEXIM2Q96MH2 286 aaKnown RBP16.6■□□□□ 0.25
COL1A1-211ENST00000507689 NELL2Q99435 816 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
COL1A1-211ENST00000507689 PLA2G2FQ9BZM2 168 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 KRT82Q9NSB4 513 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 SIT1Q9Y3P8 196 aa16.6■□□□□ 0.25
COL1A1-211ENST00000507689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL1A1-211ENST00000507689 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 CLDN5O00501 218 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 CHADO15335 359 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 PFKLP17858 780 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 AOC1P19801 751 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 BMP6P22004 513 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 YWHAQP27348 245 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 FMO5P49326 533 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-211ENST00000507689 PTPN5P54829 565 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-211ENST00000507689 INCA1Q0VD86 236 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms