RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 LARGE1O95461 756 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 NFATC1O95644 943 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 F11P03951 625 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 NLRP12P59046 1061 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 NFKB2Q00653 900 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 FAM160A1Q05DH4 1040 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 MESP2Q0VG99 397 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 HSF5Q4G112 596 aaPredicted RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 SLC39A12Q504Y0 691 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 ATF7IP2Q5U623 682 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 OVOS1Q6IE37 1185 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 IL27RAQ6UWB1 636 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 ALKAL1Q6UXT8 129 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 ATG14Q6ZNE5 492 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 APBB1IPQ7Z5R6 666 aaPredicted RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 TMEM150AQ86TG1 271 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 TMEM130Q8N3G9 435 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 CEP120Q8N960 986 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 DEPTORQ8TB45 409 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 TCEANC2Q96MN5 208 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 NACC1Q96RE7 527 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 PNKPQ96T60 521 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 OXCT2Q9BYC2 517 aaPredicted RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 NRSN2Q9GZP1 204 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 C2orf40Q9H1Z8 148 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 OSBPL3Q9H4L5 887 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 VPS54Q9P1Q0 977 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 VAV3Q9UKW4 847 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 PCDHGB2Q9Y5G2 931 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 COL5A1P20908 1838 aaPredicted RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 CACNA1DQ01668 2161 aa7.84□□□□□ -1.15
VCAN-207ENST00000507162 MUC22E2RYF6 1773 aaPredicted RBP7.84□□□□□ -1.15
VCAN-207ENST00000507162 NUP210Q8TEM1 1887 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 KLF18A0A0U1RQI7 1052 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 TBC1D3BA6NDS4 549 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 BCAT2O15382 392 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 SLC37A4O43826 429 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 SLITRK3O94933 977 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 EDN1P05305 212 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 CKMP06732 381 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 USP17L7P0C7H9 530 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ATF6P18850 670 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 KIR2DL1P43626 348 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 CSNK1EP49674 416 aaKnown RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 UCNP55089 124 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 BNC1Q01954 994 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 KDSRQ06136 332 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 MYBPC2Q14324 1141 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ZNF268Q14587 947 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 RTP5Q14D33 572 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ZNF77Q15935 545 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ZC2HC1CQ53FD0 456 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 NT5DC1Q5TFE4 455 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 KIAA1614Q5VZ46 1190 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 CDCA2Q69YH5 1023 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 HIST2H2BCQ6DN03 193 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 STKLD1Q8NE28 680 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 SH3RF2Q8TEC5 729 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 PIGOQ8TEQ8 1089 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 FAM20AQ96MK3 541 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 SLC22A12Q96S37 553 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 POLD4Q9HCU8 107 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ARHGEF4Q9NR80 690 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 FTSJ1Q9UET6 329 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 FBN2P35556 2912 aa7.83□□□□□ -1.16
VCAN-207ENST00000507162 TLN1Q9Y490 2541 aaKnown RBP7.83□□□□□ -1.16
VCAN-207ENST00000507162 TRAV19A0A0A6YYK7 116 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 BTBD18B2RXH4 712 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 M0QZQ0 153 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 TERTO14746 1132 aaKnown RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 KLK10O43240 276 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 PRPF3O43395 683 aaKnown RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 HOXB2P14652 356 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 KCNE1P15382 129 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 TNFSF9P41273 254 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 GRM5P41594 1212 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 GRK6P43250 576 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 TNFRSF4P43489 277 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 SERINC3Q13530 473 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 INF2Q27J81 1249 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 GAB4Q2WGN9 574 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 TBC1D25Q3MII6 688 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 XKR4Q5GH76 650 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 HES3Q5TGS1 186 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 SDHAF4Q5VUM1 108 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 KIAA1324Q6UXG2 1013 aaKnown RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 CHD1LQ86WJ1 897 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 ERICH1Q86X53 443 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 ARL14EPQ8N8R7 260 aaPredicted RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 KRI1Q8N9T8 703 aaKnown RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 ZNF248Q8NDW4 579 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 CCDC148Q8NFR7 591 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 LRRC15Q8TF66 581 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 BSNDQ8WZ55 320 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms