RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SPOCD1Q6ZMY3 1216 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 RNF111Q6ZNA4 994 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SATL1Q86VE3 508 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SLC25A41Q8N5S1 370 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 LENG1Q96BZ8 264 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 MFSD14AQ96MC6 490 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 POLLQ9UGP5 575 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 SCINQ9Y6U3 715 aa17.89■□□□□ 0.45
SQSTM1-211ENST00000506690 A0A088AWK7 358 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 KRT1P04264 644 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 FAM200BP0CF97 657 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 TSHRP16473 764 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 SCNN1BP51168 640 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 NOMO3P69849 1222 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 PTK7Q13308 1070 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 ITGA9Q13797 1035 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 TBCCQ15814 346 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 MDH1BQ5I0G3 518 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 CDC42EP5Q6NZY7 148 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 PRPF39Q86UA1 669 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 PALM2Q8IXS6 379 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 SLC35B2Q8TB61 432 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 KCNQ5Q9NR82 932 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 hCG_1818297A0A087WSY0 165 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 SLC16A4O15374 487 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 AP1G1O43747 822 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 CFHP08603 1231 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 VCLP18206 1134 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 CPOXP36551 454 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 RARRES1P49788 294 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 NCKAP1LP55160 1127 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 BPIFB4P59827 614 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 UBXN2AP68543 259 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 CDK18Q07002 472 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 NFIAQ12857 509 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 PHF13Q86YI8 300 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 FEZF2Q8TBJ5 459 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 POMGNT1Q8WZA1 660 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 HAUS1Q96CS2 278 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 PLEKHG4BQ96PX9 1271 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 SENP7Q9BQF6 1050 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 WWP1Q9H0M0 922 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 CIDEBQ9UHD4 219 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 IP6K2Q9UHH9 426 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 ZHX2Q9Y6X8 837 aa17.88■□□□□ 0.45
SQSTM1-211ENST00000506690 MYH9P35579 1960 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 TMCC1O94876 653 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 CFBP00751 764 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 SERPINB2P05120 415 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 RGS2P41220 211 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 ECE1P42892 770 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 RPL26P61254 145 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 SH2D4BQ5SQS7 431 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 LRRC38Q5VT99 294 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 GSTCDQ8NEC7 633 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 MPP4Q96JB8 637 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 FBXL18Q96ME1 805 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 PTTG2Q9NZH5 202 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 IVNS1ABPQ9Y6Y0 642 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 OR6B1O95007 311 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 TRIM72Q6ZMU5 477 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 CERS5Q8N5B7 392 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 SLC44A1Q8WWI5 657 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 NMD3Q96D46 503 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 DGCR14Q96DF8 476 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 KLHL4Q9C0H6 718 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 CLIC5Q9NZA1 410 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 ZNRF3Q9ULT6 936 aa17.87■□□□□ 0.45
SQSTM1-211ENST00000506690 HNRNPRO43390 633 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 COQ9O75208 318 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ATP5BP06576 529 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 MAGEA8P43361 318 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 AQP4P55087 323 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PEX3P56589 373 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PDE1BQ01064 536 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PLCB3Q01970 1234 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 FAAP100Q0VG06 881 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 BST1Q10588 318 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 DLG1Q12959 904 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 TFDP3Q5H9I0 405 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ZFYVE27Q5T4F4 411 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 UGT2A3Q6UWM9 527 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PASD1Q8IV76 773 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ARID3BQ8IVW6 561 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PIP4K2CQ8TBX8 421 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 LZICQ8WZA0 190 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 C1orf112Q9NSG2 853 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ADAMTSL1Q8N6G6 1762 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PRR5-ARHGAP8B1AHC4 643 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 I3L4J1 428 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 CDKN2BP42772 138 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 RPL7AP62424 266 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ARHGAP8P85298 464 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 CYP24A1Q07973 514 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 AOC3Q16853 763 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms