RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SLC25A3Q00325 362 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 ELF2Q15723 593 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 ARHGAP40Q5TG30 622 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 ANO1Q5XXA6 986 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 CCDC174Q6PII3 467 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 FBXO38Q6PIJ6 1188 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 MICALCLQ6ZW33 695 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 FAM9AQ8IZU1 332 aaPredicted RBP7.06□□□□□ -1.28
HERC4-213ENST00000506515 ZNF527Q8NB42 609 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 BPIFB1Q8TDL5 484 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 SMCR8Q8TEV9 937 aaPredicted RBP7.06□□□□□ -1.28
HERC4-213ENST00000506515 C18orf8Q96DM3 657 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 TTLL2Q9BWV7 592 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 HEYLQ9NQ87 328 aaPredicted RBP7.06□□□□□ -1.28
HERC4-213ENST00000506515 ABCC10Q5T3U5 1492 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 A0A0B4J269 797 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 FAM234BA2RU67 622 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 UNC119BA6NIH7 251 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 MARCH11A6NNE9 402 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 PODXLO00592 558 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 CCP110O43303 1012 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 CDKL5O76039 1030 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 NR4A1P22736 598 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 GATA3P23771 443 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 DDX6P26196 483 aaKnown RBP eCLIP7.05□□□□□ -1.28
HERC4-213ENST00000506515 DGKEP52429 567 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 PRKAG1P54619 331 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 MYO1EQ12965 1108 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 TUBB3Q13509 450 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 HLXQ14774 488 aaPredicted RBP7.05□□□□□ -1.28
HERC4-213ENST00000506515 KRT72Q14CN4 511 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 TUBB8Q3ZCM7 444 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 RBM20Q5T481 1227 aaKnown RBP7.05□□□□□ -1.28
HERC4-213ENST00000506515 PLAG1Q6DJT9 500 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 FCRL6Q6DN72 434 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 PGBD2Q6P3X8 592 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 COLGALT2Q8IYK4 626 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 SLC25A43Q8WUT9 341 aaPredicted RBP7.05□□□□□ -1.28
HERC4-213ENST00000506515 PPP2R3CQ969Q6 453 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 MUL1Q969V5 352 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 BOD1Q96IK1 185 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 PLEKHG4BQ96PX9 1271 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 PTDSS2Q9BVG9 487 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 GALNT9Q9HCQ5 603 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 SLC39A10Q9ULF5 831 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 NDRG4Q9ULP0 352 aaKnown RBP7.05□□□□□ -1.28
HERC4-213ENST00000506515 CDY1Q9Y6F8 540 aa7.05□□□□□ -1.28
HERC4-213ENST00000506515 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 WRNQ14191 1432 aaPredicted RBP eCLIP7.04□□□□□ -1.28
HERC4-213ENST00000506515 TRGV11A0A075B6L2 103 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 A0A087WZ62 844 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 FFAR2O15552 330 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 RGS10O43665 173 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 TRIAP1O43715 76 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 ZNF20P17024 532 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 LAG3P18627 525 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 ZFP36P26651 326 aaKnown RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 CD6P30203 668 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 ALDH9A1P49189 494 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 VAV2P52735 878 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 KCNAB1Q14722 419 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 PUM3Q15397 648 aaKnown RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 CDSNQ15517 529 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 NPY5RQ15761 445 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 PTCHD3Q3KNS1 767 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 RGS7BPQ6MZT1 257 aaPredicted RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 GLIS1Q8NBF1 620 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 ADAM2Q99965 735 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 STK33Q9BYT3 514 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 DHX36Q9H2U1 1008 aaKnown RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 ZNF703Q9H7S9 590 aaPredicted RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 CXorf36Q9H7Y0 433 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 UNKLQ9H9P5 680 aaKnown RBP7.04□□□□□ -1.28
HERC4-213ENST00000506515 ABCA10Q8WWZ4 1543 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 GRIN2AQ12879 1464 aa7.04□□□□□ -1.28
HERC4-213ENST00000506515 NUP160Q12769 1436 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 HNRNPDLO14979 420 aaKnown RBP7.03□□□□□ -1.28
HERC4-213ENST00000506515 RRP9O43818 475 aaKnown RBP7.03□□□□□ -1.28
HERC4-213ENST00000506515 PIAS2O75928 621 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 C1SP09871 688 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 KCNA3P22001 575 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 CHKAP35790 457 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 ADAM17P78536 824 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 ICA1Q05084 483 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 E2F2Q14209 437 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 ZRSR2Q15696 482 aaKnown RBP7.03□□□□□ -1.28
HERC4-213ENST00000506515 CRTC1Q6UUV9 634 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.03□□□□□ -1.28
HERC4-213ENST00000506515 TMEM74BQ9NUR3 256 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 INTS13Q9NVM9 706 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 DNMT3BQ9UBC3 853 aaKnown RBP7.03□□□□□ -1.28
HERC4-213ENST00000506515 DKK4Q9UBT3 224 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 RGS17Q9UGC6 210 aaPredicted RBP7.03□□□□□ -1.28
HERC4-213ENST00000506515 SERTAD3Q9UJW9 196 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 TSC22D4Q9Y3Q8 395 aa7.03□□□□□ -1.28
HERC4-213ENST00000506515 LPXNO60711 386 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms