RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MYRFLQ96LU7 910 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 ASB16Q96NS5 453 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 B3GNT5Q9BYG0 378 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 ZNF518BQ9C0D4 1074 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 ZFP14Q9HCL3 533 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 KRT82Q9NSB4 513 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 HMGXB4Q9UGU5 601 aa17.73■□□□□ 0.43
SNCA-209ENST00000506244 SOBPA7XYQ1 873 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 F8VP50 259 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 MOSPD3O75425 235 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 HMGA1P17096 107 aaKnown RBP17.72■□□□□ 0.43
SNCA-209ENST00000506244 SDHAF4Q5VUM1 108 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 ZSCAN18Q8TBC5 510 aaPredicted RBP17.72■□□□□ 0.43
SNCA-209ENST00000506244 RSAD2Q8WXG1 361 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 MRPS31Q92665 395 aaKnown RBP17.72■□□□□ 0.43
SNCA-209ENST00000506244 ELSPBP1Q96BH3 223 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 MED15Q96RN5 788 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 TRPV4Q9HBA0 871 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 IL21Q9HBE4 155 aa17.72■□□□□ 0.43
SNCA-209ENST00000506244 PRR33A8MZF0 331 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 LRRN2O75325 713 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 RTN3O95197 1032 aaPredicted RBP17.71■□□□□ 0.43
SNCA-209ENST00000506244 FAM200BP0CF97 657 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 CCDC130P13994 396 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 GJA1P17302 382 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 ORC1Q13415 861 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 FAM78AQ5JUQ0 283 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 GPR158Q5T848 1215 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 FUKQ8N0W3 1084 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 SLC44A3Q8N4M1 653 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 FAM81BQ96LP2 452 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 ARID3AQ99856 593 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 KXD1Q9BQD3 176 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 TASP1Q9H6P5 420 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 FAM49BQ9NUQ9 324 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 GCNT4Q9P109 453 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 FBXL21Q9UKT6 434 aa17.71■□□□□ 0.43
SNCA-209ENST00000506244 MYO10Q9HD67 2058 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 NUP210Q8TEM1 1887 aaPredicted RBP17.7■□□□□ 0.42
SNCA-209ENST00000506244 TMEM221A6NGB7 291 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 M0R296 226 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 CLDN5O00501 218 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 AP1G2O75843 785 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 WEE1P30291 646 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 PPP3CCP48454 512 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 PDE6CP51160 858 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 CYP4F8P98187 520 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 GCNT1Q02742 428 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 LRMPQ12912 555 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 MAN2A1Q16706 1144 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 PPM1KQ8N3J5 372 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 ENOX1Q8TC92 643 aaKnown RBP17.7■□□□□ 0.42
SNCA-209ENST00000506244 WHAMMQ8TF30 809 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 DEPDC1BQ8WUY9 529 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 TATDN2Q93075 761 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 TMEM176AQ96HP8 235 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 SLITRK1Q96PX8 696 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 TWNKQ96RR1 684 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 HNRNPABQ99729 332 aaKnown RBP17.7■□□□□ 0.42
SNCA-209ENST00000506244 TTLL2Q9BWV7 592 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 SLC2A4RGQ9NR83 387 aa17.7■□□□□ 0.42
SNCA-209ENST00000506244 GTPBP10A4D1E9 387 aaKnown RBP17.69■□□□□ 0.42
SNCA-209ENST00000506244 FAM86C2PA6NEL3 165 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 DPYSL4O14531 572 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 F11P03951 625 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 FCARP24071 287 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
SNCA-209ENST00000506244 AVPR1AP37288 418 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 PFKPQ01813 784 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 CAVIN1Q6NZI2 390 aaKnown RBP17.69■□□□□ 0.42
SNCA-209ENST00000506244 GBP6Q6ZN66 633 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 NUP93Q8N1F7 819 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 EHBP1Q8NDI1 1231 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 STKLD1Q8NE28 680 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 PDZD8Q8NEN9 1154 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 CYFIP2Q96F07 1278 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 HEXIM2Q96MH2 286 aaKnown RBP17.69■□□□□ 0.42
SNCA-209ENST00000506244 ZSWIM3Q96MP5 696 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 INTS2Q9H0H0 1204 aaKnown RBP17.69■□□□□ 0.42
SNCA-209ENST00000506244 COMMD8Q9NX08 183 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 OBP2AQ9NY56 170 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 NFE2L3Q9Y4A8 694 aa17.69■□□□□ 0.42
SNCA-209ENST00000506244 NRG2O14511 850 aaPredicted RBP17.68■□□□□ 0.42
SNCA-209ENST00000506244 OBSL1O75147 1896 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 TPM2P07951 284 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 PFKLP17858 780 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 ADORA2BP29275 332 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 CACNA2D1P54289 1103 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 SLC8A3P57103 927 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 STXBP5Q5T5C0 1151 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 PAQR9Q6ZVX9 377 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 ENOSF1Q7L5Y1 443 aa17.68■□□□□ 0.42
SNCA-209ENST00000506244 BMP8AQ7Z5Y6 402 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms