RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 GAB3Q8WWW8 586 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 FUBP3Q96I24 572 aaKnown RBP eCLIP12.18□□□□□ -0.46
SIL1-208ENST00000505945 P2RY13Q9BPV8 354 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 ARRDC1-AS1Q9H2J1 176 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CRTAC1Q9NQ79 661 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 GCNT4Q9P109 453 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 MAGEC2Q9UBF1 373 aaPredicted RBP12.18□□□□□ -0.46
SIL1-208ENST00000505945 SPAG17Q6Q759 2223 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 C2orf78A6NCI8 922 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 KIAA0391O15091 583 aaKnown RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 CCDC192P0DO97 292 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 HDCP19113 662 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 DRD1P21728 446 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 BDNFP23560 247 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 MAGEA11P43364 429 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 IFNAR2P48551 515 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 STK38Q15208 465 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 SF3A2Q15428 464 aaKnown RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 ZNF77Q15935 545 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 PPM1JQ5JR12 505 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 RDH13Q8NBN7 331 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 SH3RF2Q8TEC5 729 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 OSCP1Q8WVF1 389 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 EZH1Q92800 747 aaPredicted RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 HHIPQ96QV1 700 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 SYT15Q9BQS2 421 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 LINC00597Q9H2U6 94 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 HSPBP1Q9NZL4 362 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 TFIP11Q9UBB9 837 aaKnown RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 CDH9Q9ULB4 789 aa12.17□□□□□ -0.46
SIL1-208ENST00000505945 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
SIL1-208ENST00000505945 ANAPC1Q9H1A4 1944 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 STX6O43752 255 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
SIL1-208ENST00000505945 CST3P01034 146 aaPredicted RBP12.16□□□□□ -0.46
SIL1-208ENST00000505945 ADRB1P08588 477 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 GRIK1P39086 918 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 RAP1GAPP47736 663 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
SIL1-208ENST00000505945 USP46P62068 366 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 PSMD2Q13200 908 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 KCNB1Q14721 858 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 SURF1Q15526 300 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 E2F4Q16254 413 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 EML3Q32P44 896 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 FBXO43Q4G163 708 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 STXBP4Q6ZWJ1 553 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 TRAPPC11Q7Z392 1133 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 CAMKK1Q8N5S9 505 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 RPLP0P6Q8NHW5 317 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 CD101Q93033 1021 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 INTS4Q96HW7 963 aaKnown RBP12.16□□□□□ -0.46
SIL1-208ENST00000505945 LOXL4Q96JB6 756 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 TRIM9Q9C026 710 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 TNMDQ9H2S6 317 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 RXFP3Q9NSD7 469 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
SIL1-208ENST00000505945 SPTLC2O15270 562 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 TGFB1I1O43294 461 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 ZNF806P0C7X5 589 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 DLATP10515 647 aaKnown RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 TNNI1P19237 187 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 KCNA4P22459 653 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 WARSP23381 471 aaKnown RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 GNL1P36915 607 aaPredicted RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 ZXDBP98169 803 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 USP4Q13107 963 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 NR1H3Q13133 447 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 MAPRE1Q15691 268 aaKnown RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 SYT13Q7L8C5 426 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 CCDC127Q96BQ5 260 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 DHX58Q96C10 678 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 SPATA17Q96L03 361 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 LRRC27Q9C0I9 530 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 KIAA1586Q9HCI6 787 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 ARHGAP26Q9UNA1 814 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 NME7Q9Y5B8 376 aa12.15□□□□□ -0.46
SIL1-208ENST00000505945 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
SIL1-208ENST00000505945 GREB1Q4ZG55 1949 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms