RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 VSTM1Q6UX27 236 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 C4orf50Q6ZRC1 276 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 NELFCDQ8IXH7 590 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 SPATA17Q96L03 361 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 SLC22A12Q96S37 553 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 CYP2S1Q96SQ9 504 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 CGRRF1Q99675 332 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 EBF3Q9H4W6 596 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 DLL3Q9NYJ7 618 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 GCNT4Q9P109 453 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 CGNQ9P2M7 1197 aaKnown RBP23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 MAGEC2Q9UBF1 373 aaPredicted RBP23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 NCOR2Q9Y618 2525 aa23.74■■□□□ 1.39
SUDS3P1-201ENST00000505831 TRDMT1O14717 391 aaKnown RBP23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 KLRC4O43908 158 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 TACC1O75410 805 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 STAU1O95793 577 aaKnown RBP23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 PDGFRBP09619 1106 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 ME1P48163 572 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 DMWDQ09019 674 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 MAPRE1Q15691 268 aaKnown RBP23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 TMEM196Q5HYL7 178 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 TRIM68Q6AZZ1 485 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 HSCBQ8IWL3 235 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 GPR161Q8N6U8 529 aaKnown RBP23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 SLC39A2Q9NP94 309 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 FAM13BQ9NYF5 915 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 CFAP45Q9UL16 551 aa23.73■■□□□ 1.39
SUDS3P1-201ENST00000505831 HRO43593 1189 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 DLATP10515 647 aaKnown RBP23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 TNNI1P19237 187 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 AFMP43652 599 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 CYP2J2P51589 502 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 PSMC1P62191 440 aaKnown RBP23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 FAM160A1Q05DH4 1040 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 KNOP1Q1ED39 458 aaKnown RBP23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 HS2ST1Q7LGA3 356 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 SCN4BQ8IWT1 228 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 MYCBPAPQ8TBZ2 947 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 TMEM174Q8WUU8 243 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 MYLPFQ96A32 169 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 CCDC127Q96BQ5 260 aa23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 MRPL45Q9BRJ2 306 aaKnown RBP23.72■■□□□ 1.39
SUDS3P1-201ENST00000505831 CNOT1A5YKK6 2376 aaKnown RBP23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 CHURC1-FNTBB4DL54 471 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 SLFN14P0C7P3 912 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 BDNFP23560 247 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 GNL1P36915 607 aaPredicted RBP23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 FNTBP49356 437 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 DNM1Q05193 864 aaKnown RBP23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 ZNF77Q15935 545 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 FSTL4Q6MZW2 842 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 PCED1BQ96HM7 432 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 FNBP1Q96RU3 617 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 MMS19Q96T76 1030 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 XYLT2Q9H1B5 865 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 FBRSL1Q9HCM7 1045 aaKnown RBP23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 SERTAD1Q9UHV2 236 aa23.71■■□□□ 1.39
SUDS3P1-201ENST00000505831 USP17L7P0C7H9 530 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 ARSAP15289 507 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 TCF3P15923 654 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 HOXC13P31276 330 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 CNR2P34972 360 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 CLDN10P78369 228 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 PUM1Q14671 1186 aaKnown RBP eCLIP23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 PDGFRLQ15198 375 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 LONP2Q86WA8 852 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 GRAMD1CQ8IYS0 662 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 PLEKHO2Q8TD55 490 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 TTLL2Q9BWV7 592 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 DMAC2Q9NW81 257 aa23.7■■□□□ 1.38
SUDS3P1-201ENST00000505831 TRAV19A0A0A6YYK7 116 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 C2orf78A6NCI8 922 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 ACTN4O43707 911 aaKnown RBP23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 HSP90AA1P07900 732 aaKnown RBP23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 USP46P62068 366 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 MTF1Q14872 753 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 WDR72Q3MJ13 1102 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 CC2D1AQ6P1N0 951 aaPredicted RBP23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 PKN3Q6P5Z2 889 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 ARL14EPQ8N8R7 260 aaPredicted RBP23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 FSIP1Q8NA03 581 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 SECISBP2LQ93073 1101 aaKnown RBP23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 VRTNQ9H8Y1 702 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 PARD6AQ9NPB6 346 aa23.69■■□□□ 1.38
SUDS3P1-201ENST00000505831 PFKLP17858 780 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 ATICP31939 592 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 GJA4P35212 333 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 GRIK1P39086 918 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 GALK1P51570 392 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 MYL6P60660 151 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 NOP14P78316 857 aaKnown RBP23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 ZXDBP98169 803 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 STK4Q13043 487 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 USP4Q13107 963 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 LAIR1Q6GTX8 287 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 KIAA0895Q8NCT3 520 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 OSCP1Q8WVF1 389 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 PAGE5Q96GU1 130 aa23.68■■□□□ 1.38
SUDS3P1-201ENST00000505831 C8orf48Q96LL4 319 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms