RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CACNA2D4Q7Z3S7 1137 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 SFTPA1Q8IWL2 248 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ARL14EPQ8N8R7 260 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 RPLP0P6Q8NHW5 317 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 C2orf15Q8WU43 125 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 HPS3Q969F9 1004 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 CCDC97Q96F63 343 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 MYRFLQ96LU7 910 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 CBWD1Q9BRT8 395 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 DUSP15Q9H1R2 295 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 LINC00597Q9H2U6 94 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ECT2Q9H8V3 914 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 PDE11AQ9HCR9 933 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 TRPC7Q9HCX4 862 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 THG1LQ9NWX6 298 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 GCNT4Q9P109 453 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 FBXO2Q9UK22 296 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 KIF3AQ9Y496 699 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 THADAQ6YHU6 1953 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 MYOFQ9NZM1 2061 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ABCA7Q8IZY2 2146 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 TPRP12270 2363 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 USP24Q9UPU5 2620 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 CCDC163A0A0D9SF12 145 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PATE3B3GLJ2 98 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 GABRDO14764 452 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 GIPC1O14908 333 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 IL18RAPO95256 599 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 KRT19P08727 400 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 CCDC192P0DO97 292 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 HNRNPLP14866 589 aaKnown RBP eCLIP6.28□□□□□ -1.41e-6■■■□□ 17.3
GYPB-205ENST00000505583 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
GYPB-205ENST00000505583 PMLP29590 882 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 HOXD13P35453 343 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 MPLP40238 635 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 OPRD1P41143 372 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 LIMK1P53667 647 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 USP46P62068 366 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 TSPY1Q01534 308 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 FAM160A1Q05DH4 1040 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 SMARCB1Q12824 385 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 USP4Q13107 963 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ZNF268Q14587 947 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 NFE2Q16621 373 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 EML3Q32P44 896 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PLK5Q496M5 336 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ERICH6BQ5W0A0 696 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 IL31Q6EBC2 164 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 CC2D1AQ6P1N0 951 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 FAM171BQ6P995 826 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 SYT13Q7L8C5 426 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 BRSK2Q8IWQ3 736 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 DCP1BQ8IZD4 617 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 CSGALNACT2Q8N6G5 542 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 C12orf50Q8NA57 414 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 TTC13Q8NBP0 860 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 OR5B17Q8NGF7 314 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 OSCP1Q8WVF1 389 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 KBTBD7Q8WVZ9 684 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 MRPS31Q92665 395 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 HVCN1Q96D96 273 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 TRMT2BQ96GJ1 504 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 LOXL4Q96JB6 756 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 ZNF560Q96MR9 790 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 P2RY13Q9BPV8 354 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ACBD6Q9BR61 282 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 TMUB1Q9BVT8 246 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PANK2Q9BZ23 570 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 MTMR12Q9C0I1 747 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 PCIF1Q9H4Z3 704 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 KIF9Q9HAQ2 790 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ABCB6Q9NP58 842 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ZDHHC4Q9NPG8 344 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 CRTAC1Q9NQ79 661 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 TMEM30AQ9NV96 361 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 DUS2Q9NX74 493 aaKnown RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 GDAP2Q9NXN4 497 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 RBAKQ9NYW8 714 aaPredicted RBP6.28□□□□□ -1.4
GYPB-205ENST00000505583 SLC8A2Q9UPR5 921 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 SNX9Q9Y5X1 595 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 ADGRG1Q9Y653 693 aa6.28□□□□□ -1.4
GYPB-205ENST00000505583 CHD8Q9HCK8 2581 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 CEP192Q8TEP8 1941 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 ADAMTS9Q9P2N4 1935 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 TRAV19A0A0A6YYK7 116 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 FRMD3A2A2Y4 597 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 VPS37CA5D8V6 355 aaPredicted RBP6.27□□□□□ -1.41
GYPB-205ENST00000505583 SOBPA7XYQ1 873 aa6.27□□□□□ -1.41
GYPB-205ENST00000505583 K7EQS6 105 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms