RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BLOC1S4Q9NUP1 217 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CLIC5Q9NZA1 410 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 XPR1Q9UBH6 696 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC23A1Q9UHI7 598 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZMYND8Q9ULU4 1186 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 SCAF8Q9UPN6 1271 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 MTO1Q9Y2Z2 717 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 TESMINQ9Y4I5 508 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ANKRD18BA2A2Z9 1011 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AQP7P3A6NL99 342 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF785A8K8V0 405 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 RAB27BO00194 218 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 FCHO1O14526 889 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 COQ9O75208 318 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ACTL6BO94805 426 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 PIM1P11309 404 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 TPH1P17752 444 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AARSP49588 968 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ADCY7P51828 1080 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF135P52742 658 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 CLNS1AP54105 237 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 NPEPPSP55786 919 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AP2B1P63010 937 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATP2C1P98194 919 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 SATB1Q01826 763 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 NSUN2Q08J23 767 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ABHD18Q0P651 414 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ARHGEF7Q14155 803 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC5A9Q2M3M2 681 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AGBL4Q5VU57 503 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 SPATA1Q5VX52 437 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM160B1Q5W0V3 765 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 MRNIPQ6NTE8 343 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF529Q6P280 563 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 CRTC1Q6UUV9 634 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 Q6ZUG5 572 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 USP30Q70CQ3 517 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 HERC6Q8IVU3 1022 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 TSPYL6Q8N831 410 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ANKRD53Q8N9V6 530 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AFG1LQ8WV93 481 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ERP27Q96DN0 273 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 AJUBAQ96IF1 538 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 MYOCQ99972 504 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 RTKNQ9BST9 563 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 DDX23Q9BUQ8 820 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 TINAGL1Q9GZM7 467 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 KCNH6Q9H252 994 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM83DQ9H4H8 585 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZBTB26Q9HCK0 441 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 HELLSQ9NRZ9 838 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAM30AQ9NZY2 134 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 PPP4R1LQ9P1A2 415 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 FEM1BQ9UK73 627 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ASAP1Q9ULH1 1129 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC45A1Q9Y2W3 748 aa4.45□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZMYM3Q14202 1370 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 A0A087WZ62 844 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 CXorf49A8MYA2 514 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 B5MCH6 92 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 B9A039 149 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 F5H0A9 414 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 M0QYG6 137 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 WNT10BO00744 389 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 B4GALT3O60512 393 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 POMCP01189 267 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 VIPR2P41587 438 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 LIFRP42702 1097 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 ALDH18A1P54886 795 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 CLRN1P58418 232 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 ACTR2P61160 394 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 PPP2CBP62714 309 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 PPP2CAP67775 309 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 UBE3AQ05086 875 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 USP10Q14694 798 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 TOMM20Q15388 145 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 UTP14CQ5TAP6 766 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 FAXCQ5TGI0 409 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 PLAG1Q6DJT9 500 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 RINLQ6ZS11 566 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 ARHGEF18Q6ZSZ5 1173 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 BRINP3Q76B58 766 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 DNAJC10Q8IXB1 793 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 NUDT10Q8NFP7 164 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 DNERQ8NFT8 737 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 RAPGEF4Q8WZA2 1011 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 NUDT11Q96G61 164 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 CEP95Q96GE4 821 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 YTHDC1Q96MU7 727 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 PABPC3Q9H361 631 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 TAF1DQ9H5J8 278 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 MLXIPQ9HAP2 919 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 BARX1Q9HBU1 254 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMOD4Q9NZQ9 345 aa4.44□□□□□ -1.7
TRAPPC13-208ENST00000505553 NCDNQ9UBB6 729 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms