RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 SENP1Q9P0U3 644 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 HMGXB4Q9UGU5 601 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
DDX41-205ENST00000505081 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
DDX41-205ENST00000505081 PAX7P23759 505 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 PTPN7P35236 360 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 MMRN1Q13201 1228 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 SH3PXD2AQ5TCZ1 1133 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 LRRC6Q86X45 466 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 RFX6Q8HWS3 928 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 PALM2Q8IXS6 379 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 LRRN4Q8WUT4 740 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 DCAKDQ8WVC6 231 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 PRR11Q96HE9 360 aaPredicted RBP16.8■□□□□ 0.28
DDX41-205ENST00000505081 XYLT2Q9H1B5 865 aa16.8■□□□□ 0.28
DDX41-205ENST00000505081 SIP14410 1827 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 B4GALT5O43286 388 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 TOM1L1O75674 476 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 HOXC6P09630 235 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 EIF4BP23588 611 aaKnown RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 ALDH3A1P30838 453 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 STAT5BP51692 787 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 SLC18A1P54219 525 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 BZW1Q7L1Q6 419 aaKnown RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 DPH6Q7L8W6 267 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 NIPA2Q8N8Q9 360 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ATP11CQ8NB49 1132 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ZFP69BQ9UJL9 534 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 C2orf71A6NGG8 1288 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 PEX11AO75192 247 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 AVILO75366 819 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 DCTN3O75935 186 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 FARP2O94887 1054 aaPredicted RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 ERBB2P04626 1255 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 OAZ1P54368 228 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 SEPT7Q16181 437 aaKnown RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 PPP1R2P3Q6NXS1 205 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ADGRD1Q6QNK2 874 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ZC3H18Q86VM9 953 aaKnown RBP16.79■□□□□ 0.28
DDX41-205ENST00000505081 FAM167BQ9BTA0 163 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 CALN1Q9BXU9 219 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 ACSS3Q9H6R3 686 aa16.79■□□□□ 0.28
DDX41-205ENST00000505081 A0A0G2JND7 137 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 TCF7P36402 384 aaPredicted RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 ZNF280AP59817 542 aaPredicted RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 BBS12Q6ZW61 710 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 KCTD6Q8NC69 237 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 SDCBP2Q9H190 292 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 SYNCQ9H7C4 482 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 CPSF3Q9UKF6 684 aaKnown RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 ABLIM1O14639 778 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 ENTPD5O75356 428 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 PRKCBP05771 671 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 CDH5P33151 784 aaPredicted RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 EIF3EP60228 445 aaKnown RBP16.78■□□□□ 0.28
DDX41-205ENST00000505081 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 SERAC1Q96JX3 654 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 PCDHGC3Q9UN70 934 aa16.78■□□□□ 0.28
DDX41-205ENST00000505081 SIGLEC16A6NMB1 481 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 OGTO15294 1046 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 ZWINTO95229 277 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 MAP3K6O95382 1288 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 MIPP30301 263 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 PHBP35232 272 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 ELK3P41970 407 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 LAMTOR4Q0VGL1 99 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 ZPBP2Q6X784 338 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 AGGF1Q8N302 714 aaeCLIP16.77■□□□□ 0.28
DDX41-205ENST00000505081 BANPQ8N9N5 519 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 ZNF518BQ9C0D4 1074 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 DONSONQ9NYP3 566 aa16.77■□□□□ 0.28
DDX41-205ENST00000505081 MAFO75444 373 aaPredicted RBP16.77■□□□□ 0.27
DDX41-205ENST00000505081 CSDE1O75534 798 aaKnown RBP16.77■□□□□ 0.27
DDX41-205ENST00000505081 FAM155BO75949 473 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 RBP3P10745 1247 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 CRYMQ14894 314 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 POLNQ7Z5Q5 900 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 XYLT1Q86Y38 959 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 MIPEPQ99797 713 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 DHRS4Q9BTZ2 278 aa16.77■□□□□ 0.27
DDX41-205ENST00000505081 ASCC2Q9H1I8 757 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms