RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PPP1R37O75864 691 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 ITGB3P05106 788 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 ADSSP30520 456 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 POLR2BP30876 1174 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 AVPR1AP37288 418 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 DHPSP49366 369 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 BFSP1Q12934 665 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PSMD2Q13200 908 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 SOWAHCQ53LP3 525 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PROSER1Q86XN7 944 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 DCP1BQ8IZD4 617 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PIGKQ92643 395 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 TPSD1Q9BZJ3 242 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 EVLQ9UI08 416 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 TNRC6BQ9UPQ9 1833 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-213ENST00000505074 PI4KAP42356 2102 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 H0Y626 953 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 STX6O43752 255 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 TRIM16O95361 564 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 LDHAP00338 332 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 KRT19P08727 400 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 ARSAP15289 507 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 PNPLA4P41247 253 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 CASP5P51878 434 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 SIM1P81133 766 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 TSPY1Q01534 308 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 ALCAMQ13740 583 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 TRIM61Q5EBN2 209 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 BRSK2Q8IWQ3 736 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 CCDC26Q8TAB7 109 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 SPPL2BQ8TCT7 592 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 KIF9Q9HAQ2 790 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 IL21Q9HBE4 155 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 OLFML3Q9NRN5 406 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 TDP1Q9NUW8 608 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
PDLIM7-213ENST00000505074 PTPRDP23468 1912 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 A0A087X0B3 334 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 TMEM191BP0C7N4 346 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 ATF6P18850 670 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 GARTP22102 1010 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 GJA4P35212 333 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 MAPK8P45983 427 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 C19orf48Q6RUI8 117 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 CPA6Q8N4T0 437 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 C2orf15Q8WU43 125 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 USP13Q92995 863 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 CD101Q93033 1021 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 CBWD1Q9BRT8 395 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 STRA6Q9BX79 667 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 CCL26Q9Y258 94 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 PCDHB5Q9Y5E4 795 aa17.19■□□□□ 0.34
PDLIM7-213ENST00000505074 GCN1Q92616 2671 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 ADAMTS9Q9P2N4 1935 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 FAM221BA6H8Z2 402 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 HUS1O60921 280 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 BCKDHBP21953 392 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 DDX6P26196 483 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 WNT7BP56706 349 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 SMARCB1Q12824 385 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 STXBP4Q6ZWJ1 553 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 LRRTM3Q86VH5 581 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 CSGALNACT2Q8N6G5 542 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 TMEM206Q9H813 350 aa17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 MAGED2Q9UNF1 606 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-213ENST00000505074 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 HAPLN1P10915 354 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ENGP17813 658 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 MYL7Q01449 175 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 NAIF1Q69YI7 327 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ANO7Q6IWH7 933 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 PIP4P1Q86T03 277 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 RASSF3Q86WH2 238 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms