RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ZSCAN18Q8TBC5 510 aaPredicted RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 IRF7Q92985 503 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MYADMQ96S97 322 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 HNRNPABQ99729 332 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 KCNH6Q9H252 994 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MFSD1Q9H3U5 465 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 CRTAC1Q9NQ79 661 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 HCFC1R1Q9NWW0 138 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 TRPM5Q9NZQ8 1165 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 HESX1Q9UBX0 185 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MRPS17Q9Y2R5 130 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 NCANO14594 1321 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 TRAV19A0A0A6YYK7 116 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 SLC38A8A6NNN8 435 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 F8VP50 259 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 AP1G2O75843 785 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 VNN2O95498 520 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 PAEPP09466 180 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GLULP15104 373 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CEBPBP17676 345 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 PSMC3P17980 439 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CD58P19256 250 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 BDNFP23560 247 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 YWHAQP27348 245 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TPM4P67936 248 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 NTHL1P78549 312 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GOLGA8FQ08AF8 430 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GOLGA8DPQ0D2H9 430 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 ZNF268Q14587 947 aaPredicted RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 DDR2Q16832 855 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 SLC5A9Q2M3M2 681 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 KLHL40Q2TBA0 621 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CBWD6Q4V339 395 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CBWD3Q5JTY5 395 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CBWD5Q5RIA9 395 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 FKBP15Q5T1M5 1219 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GPR158Q5T848 1215 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CC2D1AQ6P1N0 951 aaPredicted RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 ACOT1Q86TX2 421 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 FAM35AQ86V20 835 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 MON1AQ86VX9 555 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TMC8Q8IU68 726 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 NUP93Q8N1F7 819 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 ARHGAP18Q8N392 663 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TMEM130Q8N3G9 435 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 PPM1KQ8N3J5 372 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 SLC44A3Q8N4M1 653 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CELF5Q8N6W0 485 aaKnown RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 SHKBP1Q8TBC3 707 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GPT2Q8TD30 523 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 GIPC2Q8TF65 315 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 ING5Q8WYH8 240 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 MCRS1Q96EZ8 462 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CYFIP2Q96F07 1278 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TMEM176AQ96HP8 235 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 FAM84AQ96KN4 292 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 HEXIM2Q96MH2 286 aaKnown RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CDK5RAP1Q96SZ6 601 aaKnown RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 LPIN3Q9BQK8 851 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TRMT61BQ9BVS5 477 aaKnown RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 IRF2BPLQ9H1B7 796 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CD320Q9NPF0 282 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TRPV5Q9NQA5 729 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CISHQ9NSE2 258 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TMLHEQ9NVH6 421 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 CDH22Q9UJ99 828 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 MAGED2Q9UNF1 606 aaPredicted RBP8.27□□□□□ -1.09
SKP2-203ENST00000504386 HCN4Q9Y3Q4 1203 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 NUMBLQ9Y6R0 609 aa8.27□□□□□ -1.09
SKP2-203ENST00000504386 TSC2P49815 1807 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 DENND4AQ7Z401 1863 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 TMEM221A6NGB7 291 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 SMTNL1A8MU46 457 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 M0R296 226 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 PES1O00541 588 aaKnown RBP8.26□□□□□ -1.09
SKP2-203ENST00000504386 NCAM2O15394 837 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 MED7O43513 233 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 ATP2C2O75185 946 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 ASGR2P07307 311 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 VDRP11473 427 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 HMGA1P17096 107 aaKnown RBP8.26□□□□□ -1.09
SKP2-203ENST00000504386 NPR3P17342 541 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 RAP1GAPP47736 663 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 PSEN1P49768 467 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 TUBP50607 506 aa8.26□□□□□ -1.09
SKP2-203ENST00000504386 MLLT6P55198 1093 aaPredicted RBP8.26□□□□□ -1.09
SKP2-203ENST00000504386 CDH8P55286 799 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms