RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PPP2R5EQ16537 467 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SYDE2Q5VT97 1194 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SLC9A4Q6AI14 798 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PDXDC2PQ6P474 469 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 FBXO33Q7Z6M2 555 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 CCDC71Q8IV32 467 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 KBTBD2Q8IY47 623 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 NSUN6Q8TEA1 469 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 AASSQ9UDR5 926 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 STAP2Q9UGK3 403 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 VPS28Q9UK41 221 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PCDHB3Q9Y5E6 796 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SQORQ9Y6N5 450 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 FRMPD2Q68DX3 1309 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 CFAP74Q9C0B2 1584 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 TCP11X1B4DZS4 312 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 BTN3A3O00478 584 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PRKAR1AP10644 381 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GLULP15104 373 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PLCG1P19174 1290 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 INHBEP58166 350 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 S100A12P80511 92 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 BEX3Q00994 111 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 RFPL4BQ6ZWI9 263 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 MAEAQ7L5Y9 396 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SETDB2Q96T68 719 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GMLQ99445 158 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 BLOC1S4Q9NUP1 217 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 LRFN1Q9P244 771 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 POLHQ9Y253 713 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PASKQ96RG2 1323 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 CASC3O15234 703 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PROCP04070 461 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 GLAP06280 429 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ANXA6P08133 673 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ACSL1P33121 698 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ARHGDIBP52566 201 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ERVK-8P63133 956 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 PTRHD1Q6GMV3 140 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 KIF2BQ8N4N8 673 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ZGPATQ8N5A5 531 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SLC26A7Q8TE54 656 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 BTBD2Q9BX70 525 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 RAB17Q9H0T7 212 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ALG13Q9NP73 1137 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ZC3H7BQ9UGR2 993 aaKnown RBP6.49□□□□□ -1.37
CLCN3-204ENST00000504131 ERVK-11Q9UQG0 969 aa6.49□□□□□ -1.37
CLCN3-204ENST00000504131 SHOXO15266 292 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PRDM1O75626 825 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 SP100P23497 879 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 SARSP49591 514 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ARHGDIAP52565 204 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TNNC1P63316 161 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GABREP78334 506 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 RNASELQ05823 741 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 Q5PR19 223 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TMC4Q7Z404 712 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 RIBC1Q8N443 379 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CAMK1GQ96NX5 476 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 NIFKQ9BYG3 293 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CCDC86Q9H6F5 360 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ING3Q9NXR8 418 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 VSX1Q9NZR4 365 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CRNNQ9UBG3 495 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 VPS51Q9UID3 782 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CLEC11AQ9Y240 323 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CCDC182A6NF36 153 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 MYO1GB0I1T2 1018 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PGRMC1O00264 195 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CCDC22O60826 627 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 RTN2O75298 545 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 UMPSP11172 480 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 HLA-DPA1P20036 260 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 KCNA5P22460 613 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TCEA1P23193 301 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CEBPGP53567 150 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PRAMEP78395 509 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GALK2Q01415 458 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TAF5Q15542 800 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 FAM160B2Q86V87 743 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CALML4Q96GE6 196 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 TMEM237Q96Q45 408 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GINS4Q9BRT9 223 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 OSBPL5Q9H0X9 879 aaPredicted RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 ETNK1Q9HBU6 452 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 RIMKLBQ9ULI2 386 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 COG5Q9UP83 839 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 CDC42BPBQ9Y5S2 1711 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 DDX39AO00148 427 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 GPC4O75487 556 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 BBOX1O75936 387 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 HOXC8P31273 242 aa6.48□□□□□ -1.37
CLCN3-204ENST00000504131 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
CLCN3-204ENST00000504131 AP3B2Q13367 1082 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms