RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 DGKHQ86XP1 1220 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 PRIMA1Q86XR5 153 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 COL23A1Q86Y22 540 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-208ENST00000504047 SMCR8Q8TEV9 937 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-208ENST00000504047 RAPGEF4Q8WZA2 1011 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 RFKQ969G6 155 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 SPSB4Q96A44 273 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 SMURF2Q9HAU4 748 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 CPNE5Q9HCH3 593 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 ARHGEF3Q9NR81 526 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 SEMA4GQ9NTN9 838 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 PTGFRNQ9P2B2 879 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 CHPF2Q9P2E5 772 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 CPNE7Q9UBL6 633 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
ATXN3-208ENST00000504047 TRIM43BA6NCK2 446 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 hCG_1984214I3L0E3 225 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 PYCARD-AS1I3L0S3 204 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 QSOX1O00391 747 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 PARNO95453 639 aaKnown RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 C1RP00736 705 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 IGLV2-14P01704 120 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 PDHA1P08559 390 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 WT1P19544 449 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 KLRC1P26715 233 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 CD38P28907 300 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 CCT8P50990 548 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 DCAF12L1Q5VU92 463 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 ANKRD16Q6P6B7 361 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF804AQ7Z570 1209 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 WDR53Q7Z5U6 358 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 SPARTQ8N0X7 666 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 OSCP1Q8WVF1 389 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 IPCEF1Q8WWN9 437 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 ATG4AQ8WYN0 398 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 TRIM43Q96BQ3 446 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 NMD3Q96D46 503 aaKnown RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 APIPQ96GX9 242 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 C8orf48Q96LL4 319 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 NUP62CLQ9H1M0 184 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 BHMT2Q9H2M3 363 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 KLK15Q9H2R5 256 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 SERHLQ9NQF3 203 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 SERTAD4Q9NUC0 356 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 ASB6Q9NWX5 421 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 DKK3Q9UBP4 350 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 CCNL1Q9UK58 526 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 ST3GAL5Q9UNP4 418 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 SSX2IPQ9Y2D8 614 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 MRPS17Q9Y2R5 130 aaKnown RBP3.77□□□□□ -1.81
ATXN3-208ENST00000504047 WNT6Q9Y6F9 365 aa3.77□□□□□ -1.81
ATXN3-208ENST00000504047 LOC102723971A0A1B0GUV8 181 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 A1L4Q6 167 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 KIF3BO15066 747 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 CCP110O43303 1012 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 PROP1O75360 226 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 INMTO95050 263 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 DLDP09622 509 aaKnown RBP3.76□□□□□ -1.81
ATXN3-208ENST00000504047 KCNA3P22001 575 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 PRKAR1BP31321 381 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 LIPAP38571 399 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 CLCN2P51788 898 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 PDE1AP54750 535 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 FMO1Q01740 532 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 SEMA5AQ13591 1074 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 HLTFQ14527 1009 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF362Q5T0B9 420 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-208ENST00000504047 TREML2Q5T2D2 321 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 DEPDC1Q5TB30 811 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 DPY19L2P1Q6NXN4 242 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 MAVSQ7Z434 540 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF280BQ86YH2 543 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 YAF2Q8IY57 180 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 LRRC71Q8N4P6 559 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 BPIFB1Q8TDL5 484 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 ZNF384Q8TF68 577 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 XAGE5Q8WWM1 108 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 MAML1Q92585 1016 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 GLG1Q92896 1179 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 PPP2R3CQ969Q6 453 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 DPCDQ9BVM2 203 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-208ENST00000504047 STK31Q9BXU1 1019 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 BTBD1Q9H0C5 482 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 CXorf36Q9H7Y0 433 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 ALG13Q9NP73 1137 aaKnown RBP3.76□□□□□ -1.81
ATXN3-208ENST00000504047 XPNPEP3Q9NQH7 507 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 IL17RBQ9NRM6 502 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 HDAC9Q9UKV0 1011 aa3.76□□□□□ -1.81
ATXN3-208ENST00000504047 TMEM233B4DJY2 109 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 OVOL3O00110 214 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 PSMD9O00233 223 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 FOXN3O00409 490 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 RGS10O43665 173 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 FESP07332 822 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 IL6RP08887 468 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-208ENST00000504047 NPSP0C0P6 89 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 CYP2C18P33260 490 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 PTH2RP49190 550 aa3.75□□□□□ -1.81
ATXN3-208ENST00000504047 ATXN1P54253 815 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms