RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RCN2Q14257 317 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 EGFLAMQ63HQ2 1017 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SFR1Q86XK3 245 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF677Q86XU0 584 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TTC39CQ8N584 583 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 LRRC52Q8N7C0 313 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM161BQ8NDZ6 487 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ACTRT1Q8TDG2 376 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CPLX3Q8WVH0 158 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RAPGEF5Q92565 580 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CLP1Q92989 425 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TRIM47Q96LD4 638 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PCMTD1Q96MG8 357 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CCT7Q99832 543 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 OXCT2Q9BYC2 517 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.93□□□□□ -1.944e-6■■□□□ 13.6
NEDD4-204ENST00000503468 PLGRKTQ9HBL7 147 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 VPS45Q9NRW7 570 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PCYOX1Q9UHG3 505 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TBX21Q9UL17 535 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NOVA2Q9UNW9 492 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SCAF8Q9UPN6 1271 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PLAAQ9Y263 795 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RAD54BQ9Y620 910 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 VWA5AO00534 786 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 HGSO14964 777 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZBTB43O43298 467 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TPD52L2O43399 206 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CLASP2O75122 1294 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 UFL1O94874 794 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ABHD2P08910 425 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NCAM1P13591 858 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RARGP13631 454 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KLRK1P26718 216 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GSTO1P78417 241 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ATP2B2Q01814 1243 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KCNMA1Q12791 1236 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 IKQ13123 557 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 VARS2Q5ST30 1063 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KCTD16Q68DU8 428 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PDXDC1Q6P996 788 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 B3GNT6Q6ZMB0 384 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 HERC6Q8IVU3 1022 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ALLCQ8N6M5 410 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GLIS1Q8NBF1 620 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SERPINB12Q96P63 405 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF317Q96PQ6 595 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 DDX23Q9BUQ8 820 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PRKD2Q9BZL6 878 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 IMPG2Q9BZV3 1241 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TTC28Q96AY4 2481 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TRIOBPQ9H2D6 2365 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KLF18A0A0U1RQI7 1052 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ANKRD61A6NGH8 418 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DDTLA6NHG4 134 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SOWAHDA6NJG2 315 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF701M0R085 212 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KLK8O60259 260 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ASS1P00966 412 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 H2AFZP0C0S5 128 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 LINGO3P0C6S8 592 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TPBGLP0DKB5 382 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 VAV1P15498 845 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 UBA7P41226 1012 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KIF11P52732 1056 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DLG4P78352 724 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 UBXN1Q04323 297 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DNAJC3Q13217 504 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT81Q14533 505 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT31Q15323 416 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SEPT7Q16181 437 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CLPPQ16740 277 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PEAR1Q5VY43 1037 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KCTD11Q693B1 232 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ANO7Q6IWH7 933 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 H2AFVQ71UI9 128 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 C17orf82Q86X59 251 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CNBD1Q8NA66 436 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 GOLM1Q8NBJ4 401 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TRIM63Q969Q1 353 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 LENG1Q96BZ8 264 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF689Q96CS4 500 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 METTL2AQ96IZ6 378 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SPATA16Q9BXB7 569 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SH2D4AQ9H788 454 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 BMP2KQ9NSY1 1161 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NDE1Q9NXR1 346 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 UVRAGQ9P2Y5 699 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 EPS15L1Q9UBC2 864 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 RBPJLQ9UBG7 517 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 AFF4Q9UHB7 1163 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SPDYE16A6NNV3 312 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 IGF2BP3O00425 579 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CCNE2O96020 404 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 HSPA1AP0DMV8 641 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 HSPA1BP0DMV9 641 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PYGBP11216 843 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PTPN2P17706 415 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT15P19012 456 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms