RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 USP33Q8TEY7 942 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 LBHD1Q9BQE6 289 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 CASS4Q9NQ75 786 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 ACADSP16219 412 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 SCTRP47872 440 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 ATG4AQ8WYN0 398 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 THAP11Q96EK4 314 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 KDM4CQ9H3R0 1056 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 TEKT2Q9UIF3 430 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 C16orf96A6NNT2 1141 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 CLCN3P51790 818 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 RHBDL3P58872 404 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 NAPEPLDQ6IQ20 393 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 DACH2Q96NX9 599 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 AKAP3O75969 853 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 GLI1P08151 1106 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 FDFT1P37268 417 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 MTM1Q13496 603 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 GPR182O15218 404 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 SEC24DO94855 1032 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 CYBBP04839 570 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM200BP0CF97 657 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 PTGER2P43116 358 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 FLOT2Q14254 428 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 COBLL1Q53SF7 1204 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 NLRP9Q7RTR0 991 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 SLC5A5Q92911 643 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 CDC42EP4Q9H3Q1 356 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 STRNO43815 780 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 MCL1Q07820 350 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 TMEM119Q4V9L6 283 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 TFDP3Q5H9I0 405 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 TRIM45Q9H8W5 580 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 COG4Q9H9E3 785 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 APOA4P06727 396 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 SERPINB10P48595 397 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 COPAP53621 1224 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 CCNJLQ8IV13 435 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF669Q96BR6 464 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF518BQ9C0D4 1074 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 DCAF6Q58WW2 860 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF555Q8NEP9 628 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 OSGEPQ9NPF4 335 aa16.79■□□□□ 0.28
HMGXB3-202ENST00000503427 KPNA6O60684 536 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 C11orf63Q6NUN7 778 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CATSPERBQ9H7T0 1116 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CCDC78A2IDD5 438 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CES2O00748 559 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 PTENP60484 403 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 EFHBQ8N7U6 833 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 TFB1MQ8WVM0 346 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 LOC100653049A0A140TA62 436 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 NDUFS3O75489 264 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 KRT34O76011 436 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CYP3A4P08684 503 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 TM4SF1P30408 202 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 OTOP1Q7RTM1 612 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 SLC7A14Q8TBB6 771 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 HEY2Q9UBP5 337 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 BLOC1S6Q9UL45 172 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 H0Y626 953 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 TRIM16O95361 564 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 VDRP11473 427 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CDH2P19022 906 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 RARRES1P49788 294 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 MAP3K10Q02779 954 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CYP24A1Q07973 514 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 CDR2LQ86X02 465 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 WDR49Q8IV35 697 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 EXD1Q8NHP7 514 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF507Q8TCN5 953 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 ADNPQ9H2P0 1102 aa16.78■□□□□ 0.28
HMGXB3-202ENST00000503427 GLRA3O75311 464 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 PROSCO94903 275 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 ODC1P11926 461 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 CPA2P48052 419 aa16.77■□□□□ 0.28
HMGXB3-202ENST00000503427 CCNG2Q16589 344 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms