RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TATDN2Q93075 761 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 TMEM176AQ96HP8 235 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 SEPT5Q99719 369 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 INTS2Q9H0H0 1204 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 HSD3B7Q9H2F3 369 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 DPEP3Q9H4B8 488 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 TRPV4Q9HBA0 871 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 DMAP1Q9NPF5 467 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 PLCB1Q9NQ66 1216 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 SLC27A5Q9Y2P5 690 aa11.4□□□□□ -0.58
UBE2D3-212ENST00000502563 C5orf42Q9H799 3197 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 C2CD4DB7Z1M9 353 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 HCRTO43612 131 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 ATP2C2O75185 946 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 PON1P27169 355 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF132P52740 706 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 RAD23BP54727 409 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 NFKBIBQ15653 356 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 ZSCAN23Q3MJ62 389 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 MDH1BQ5I0G3 518 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 SNX30Q5VWJ9 437 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 PHLDB3Q6NSJ2 640 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 DPY19L2P1Q6NXN4 242 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 DENND5BQ6ZUT9 1274 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 MTSS1LQ765P7 747 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 NPAS3Q8IXF0 933 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 PPM1KQ8N3J5 372 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC4A11Q8NBS3 891 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 FGF13Q92913 245 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 E2F7Q96AV8 911 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 TWNKQ96RR1 684 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 ARID3AQ99856 593 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 B3GNT5Q9BYG0 378 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 IL21Q9HBE4 155 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 OBP2AQ9NY56 170 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 HMGXB4Q9UGU5 601 aa11.39□□□□□ -0.59
UBE2D3-212ENST00000502563 SYCE3A1L190 88 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 TNFRSF10BO14763 440 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 MOSPD3O75425 235 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 VDRP11473 427 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 BDNFP23560 247 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 ANXA13P27216 316 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 PDE6CP51160 858 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 MFAP3P55082 362 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 CYP27A1Q02318 531 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 IQCB1Q15051 598 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 KRT31Q15323 416 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC5A9Q2M3M2 681 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 GAREM2Q75VX8 874 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 APTXQ7Z2E3 356 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 ACOT1Q86TX2 421 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 UBALD2Q8IYN6 164 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 ZNF276Q8N554 614 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 PDZD8Q8NEN9 1154 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 SHC3Q92529 594 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 ERGIC2Q96RQ1 377 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 CDH22Q9UJ99 828 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 MRPS23Q9Y3D9 190 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 GREB1Q4ZG55 1949 aa11.38□□□□□ -0.59
UBE2D3-212ENST00000502563 TCF20Q9UGU0 1960 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 PATJQ8NI35 1801 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 LGALS16A8MUM7 142 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 F8VP50 259 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 PI4K2BG5E9Z4 385 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 ECI2O75521 394 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 CLSTN1O94985 981 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 F11P03951 625 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 FAM200BP0CF97 657 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 ALADP13716 330 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 TCF3P15923 654 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 NPR3P17342 541 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 TIE1P35590 1138 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 GRIK1P39086 918 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 CCR2P41597 374 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 TUBP50607 506 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 HTR4Q13639 388 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 FKBP15Q5T1M5 1219 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 CLEC20AQ6ZU45 233 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 SCML4Q8N228 414 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 ANKRD52Q8NB46 1076 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 SHKBP1Q8TBC3 707 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 SLC2A14Q8TDB8 520 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 RPGRIP1Q96KN7 1286 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 GCNAQ96QF7 691 aa11.37□□□□□ -0.59
UBE2D3-212ENST00000502563 MYADMQ96S97 322 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms