RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RNF43Q68DV7 783 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 CPNE8Q86YQ8 564 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 RFWD2Q8NHY2 731 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 CYP2W1Q8TAV3 490 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 PPP2R3CQ969Q6 453 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 C18orf8Q96DM3 657 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 FNBP1Q96RU3 617 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 B3GNT4Q9C0J1 378 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 BHMT2Q9H2M3 363 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 PABPC3Q9H361 631 aaKnown RBP6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 RAVER2Q9HCJ3 691 aaKnown RBP6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 UBN1Q9NPG3 1134 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 MAN1C1Q9NR34 630 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 SLC38A7Q9NVC3 462 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 GRHL1Q9NZI5 618 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 KLHL14Q9P2G3 628 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 SEPT3Q9UH03 358 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
SOX2-OT-218ENST00000498731 UMODL1Q5DID0 1318 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CEP290O15078 2479 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 LAMB2P55268 1798 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 LOC105371267A0A1B0GV96 52 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 A0A1W2PRQ8 180 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TCRBV7S2A1N4TA0A589 114 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POTEB3A0JP26 581 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POTEFA5A3E0 1075 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POTECB2RU33 542 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 E9PBE3 544 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 K7EPI3 171 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PJA2O43164 708 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 HAUS5O94927 633 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 IDO1P14902 403 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TCF7P36402 384 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 RPL21P46778 160 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NKX2-5P52952 324 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CUL1Q13616 776 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 MTFR1Q15390 333 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NBPF12Q5TAG4 269 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PPP2R2DQ66LE6 453 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CCSAPQ6IQ19 270 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POTEBQ6S5H4 581 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 BBS5Q8N3I7 341 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 SAMD3Q8N6K7 520 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 FAM151AQ8WW52 585 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PANX3Q96QZ0 392 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 SMC6Q96SB8 1091 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NOC4LQ9BVI4 516 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PRM3Q9NNZ6 103 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NGRNQ9NPE2 291 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARHGEF4Q9NR80 690 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CHORDC1Q9UHD1 332 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ADAMTS6Q9UKP5 1117 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 KIAA1257Q9ULG3 409 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 INPP5FQ9Y2H2 1132 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 UTP11Q9Y3A2 253 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 MAGED1Q9Y5V3 778 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZNF536O15090 1300 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ABCB11O95342 1321 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZNF541Q9H0D2 1346 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TP73O15350 636 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 KLRC4O43908 158 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ENTPD3O75355 529 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ANPEPP15144 967 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CHKAP35790 457 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 EIF2B2P49770 351 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PTPN5P54829 565 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 DCTN2Q13561 401 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ATP1A4Q13733 1029 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 EDRF1Q3B7T1 1238 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZNF658Q5TYW1 1059 aaPredicted RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ANGEL2Q5VTE6 544 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARL6IP4Q66PJ3 421 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 SNRNP48Q6IEG0 339 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 INTS8Q75QN2 995 aaKnown RBP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 SCYL3Q8IZE3 742 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 AGGF1Q8N302 714 aaeCLIP6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 GALNT4Q8N4A0 578 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 POU5F2Q8N7G0 328 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PYDC1Q8WXC3 89 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PPP1R14BQ96C90 147 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CDHR1Q96JP9 859 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 LRRC37BQ96QE4 947 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 IDI2Q9BXS1 227 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PITPNM3Q9BZ71 974 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ACP6Q9NPH0 428 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NYAP2Q9P242 653 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 RABGAP1Q9Y3P9 1069 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 CCDC88AQ3V6T2 1871 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 TAF1LQ8IZX4 1826 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 LY75O60449 1722 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 EMSYQ7Z589 1322 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 UBR3Q6ZT12 1888 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 GUCY1B2O75343 617 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NOL4O94818 638 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 ZBED1O96006 694 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 MYL3P08590 195 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 NUDT17P0C025 328 aa6.05□□□□□ -1.44
SOX2-OT-218ENST00000498731 PEX2P28328 305 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms