RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 NRBP2Q9NSY0 501 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 PARVAQ9NVD7 372 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 BTBD7Q9P203 1132 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 ZFP69BQ9UJL9 534 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 BANF1O75531 89 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 MARK3P27448 753 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 RFC5P40937 340 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 RASSF2P50749 326 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
COL6A1-206ENST00000498614 KCNN1Q92952 543 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 MIPEPQ99797 713 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF148Q9UQR1 794 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 BRD2P25440 801 aaKnown RBP17.2■□□□□ 0.34
COL6A1-206ENST00000498614 PTPN4P29074 926 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 TCF7P36402 384 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-206ENST00000498614 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
COL6A1-206ENST00000498614 C11orf91Q3C1V1 193 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 BRSK2Q8IWQ3 736 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 ZBED8Q8IZ13 594 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 TLE6Q9H808 572 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 SPATS2LQ9NUQ6 558 aaKnown RBP17.2■□□□□ 0.34
COL6A1-206ENST00000498614 SENP1Q9P0U3 644 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
COL6A1-206ENST00000498614 WDR91A4D1P6 747 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 SRGAP2CP0DJJ0 459 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF132P52740 706 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 MYL6P60660 151 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 CTC1Q2NKJ3 1217 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 CLNKQ7Z7G1 428 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 LMNTD2Q8IXW0 634 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-206ENST00000498614 MCEEQ96PE7 176 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 DCTN4Q9UJW0 460 aa17.19■□□□□ 0.34
COL6A1-206ENST00000498614 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 C2CD2LO14523 706 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 PIAS1O75925 651 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ASS1P00966 412 aaKnown RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 KRT4P19013 534 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 MMP8P22894 467 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 HUNKP57058 714 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 EFTUD2Q15029 972 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■■ 31.1
COL6A1-206ENST00000498614 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 KHDC1Q4VXA5 237 aaKnown RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 CMPK2Q5EBM0 449 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 SCARA5Q6ZMJ2 495 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 NCAPG2Q86XI2 1143 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ANKMY2Q8IV38 441 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ALLCQ8N6M5 410 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 UBR7Q8N806 425 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 RFWD2Q8NHY2 731 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 DNAJC9Q8WXX5 260 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ACSF2Q96CM8 615 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF668Q96K58 619 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 LNPEPQ9UIQ6 1025 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ALOX15BO15296 676 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 MAP3K13O43283 966 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 FAM189A1O60320 539 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 MSCO60682 206 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 KRT1P04264 644 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 ADRA1DP25100 572 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 LMNB2Q03252 620 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 OVGP1Q12889 678 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 LBX2Q6XYB7 198 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 LRRC71Q8N4P6 559 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 SYT15Q9BQS2 421 aa17.18■□□□□ 0.34
COL6A1-206ENST00000498614 PSMC3IPQ9P2W1 217 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-206ENST00000498614 F8VP50 259 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 GOLGA8MH3BSY2 632 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 ACADSP16219 412 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 GPX6P59796 221 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 PDIA2Q13087 525 aaKnown RBP17.17■□□□□ 0.34
COL6A1-206ENST00000498614 PPIL2Q13356 520 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SPDYAQ5MJ70 313 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 RNASEH2BQ5TBB1 312 aaKnown RBP17.17■□□□□ 0.34
COL6A1-206ENST00000498614 MFSD7Q6UXD7 560 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 C4orf50Q6ZRC1 276 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SH3TC2Q8TF17 1288 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 HAUS1Q96CS2 278 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SLITRK1Q96PX8 696 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 CADM1Q9BY67 442 aaKnown RBP17.17■□□□□ 0.34
COL6A1-206ENST00000498614 CISHQ9NSE2 258 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 IVNS1ABPQ9Y6Y0 642 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 PTPRFP10586 1907 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 TMEM191CA6NGB0 347 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 TOM1L1O75674 476 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms