RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 TASP1Q9H6P5 420 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 ZMYM5Q9UJ78 669 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
HSPG2-213ENST00000498495 F8VP50 259 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 CLDN5O00501 218 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 STK25O00506 426 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 DPYSL4O14531 572 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 COL9A1P20849 921 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 VIPR2P41587 438 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 FMO5P49326 533 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 CYP4F8P98187 520 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 ORC1Q13415 861 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 TPD52L1Q16890 204 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 STXBP5Q5T5C0 1151 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 ARID3BQ8IVW6 561 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 TRMT2BQ96GJ1 504 aaKnown RBP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 TRMT61BQ9BVS5 477 aaKnown RBP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 TRPV4Q9HBA0 871 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 SLC2A4RGQ9NR83 387 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
HSPG2-213ENST00000498495 CUL9Q8IWT3 2517 aa13.61□□□□□ -0.23
HSPG2-213ENST00000498495 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 HEPACAM2A8MVW5 462 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-213ENST00000498495 PSMC3P17980 439 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 FCARP24071 287 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 DDX6P26196 483 aaKnown RBP eCLIP13.6□□□□□ -0.23
HSPG2-213ENST00000498495 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
HSPG2-213ENST00000498495 PFKPQ01813 784 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 INCA1Q0VD86 236 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 LRMPQ12912 555 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 PAQR9Q6ZVX9 377 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 MFSD6LQ8IWD5 586 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 YAF2Q8IY57 180 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 SIX5Q8N196 739 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 MAB21L3Q8N8X9 362 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 C12orf29Q8N999 325 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 SMARCD1Q96GM5 515 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 HMGXB4Q9UGU5 601 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 CA14Q9ULX7 337 aa13.6□□□□□ -0.23
HSPG2-213ENST00000498495 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 PMM2O15305 246 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 P4HA2O15460 535 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 CILPO75339 1184 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 AP1G2O75843 785 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 CCDC130P13994 396 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 RFX1P22670 979 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 WEE1P30291 646 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 AVPR1AP37288 418 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 IFRD2Q12894 506 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-213ENST00000498495 GRM2Q14416 872 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 SLC44A4Q53GD3 710 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 ZNF394Q53GI3 561 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TXNDC8Q6A555 127 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 VITQ6UXI7 678 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TMEM150AQ86TG1 271 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 FAM35AQ86V20 835 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 MON1AQ86VX9 555 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 CMTM8Q8IZV2 173 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 FUKQ8N0W3 1084 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 NUP93Q8N1F7 819 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 SLC2A14Q8TDB8 520 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 WHAMMQ8TF30 809 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 DEPDC1BQ8WUY9 529 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 IRF7Q92985 503 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 HEXIM2Q96MH2 286 aaKnown RBP13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TWNKQ96RR1 684 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 FAM124BQ9H5Z6 455 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-213ENST00000498495 BRD9Q9H8M2 597 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 FAM49BQ9NUQ9 324 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
HSPG2-213ENST00000498495 TECTAO75443 2155 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 KRBA1A5PL33 1030 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 ZNF263O14978 683 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 MBD3O95983 291 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 ERCC5P28715 1186 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-213ENST00000498495 ADORA2BP29275 332 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 AVPR2P30518 371 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 GDI1P31150 447 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 PPP3CCP48454 512 aa13.58□□□□□ -0.24
HSPG2-213ENST00000498495 USP46P62068 366 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms