RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 UBR7Q8N806 425 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 STRIP2Q9ULQ0 834 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 CEP83Q9Y592 693 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 A0A1B0GUA9 196 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 SMAPO00193 183 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 LIASO43766 372 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 ASS1P00966 412 aaKnown RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 EDN1P05305 212 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 BRAFP15056 766 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 CDH5P33151 784 aaPredicted RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 MORF4L2Q15014 288 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 KYNUQ16719 465 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 VSTM1Q6UX27 236 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 PCGF5Q86SE9 256 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 C7orf31Q8N865 590 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 MAGEB18Q96M61 343 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 TRIM7Q9C029 511 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 RNF208Q9H0X6 261 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 HAUS2Q9NVX0 235 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 R3HDM2Q9Y2K5 976 aaKnown RBP13.08□□□□□ -0.31
AFF3-215ENST00000498090 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.31
AFF3-215ENST00000498090 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 A0A1W2PQY0 241 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 MGRN1O60291 552 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 TOM1L1O75674 476 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 VTNP04004 478 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 TAS2R40P59535 323 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 IL9RQ01113 521 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 RIPK1Q13546 671 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 SESTD1Q86VW0 696 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 RHPN2Q8IUC4 686 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 SLITRK1Q96PX8 696 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 PPP1R16BQ96T49 567 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 FAM49AQ9H0Q0 323 aaPredicted RBP13.08□□□□□ -0.32
AFF3-215ENST00000498090 FETUBQ9UGM5 382 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 OGDHLQ9ULD0 1010 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 SIP14410 1827 aa13.08□□□□□ -0.32
AFF3-215ENST00000498090 SMIM35A0A1B0GVV1 85 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 GJB6O95452 261 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 ITGAVP06756 1048 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 CYP2C9P11712 490 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 STX2P32856 288 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 MAGEA4P43358 317 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 IFNAR2P48551 515 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 FAM47CQ5HY64 1035 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 SPOPLQ6IQ16 392 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 DNAJC24Q6P3W2 148 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 ALLCQ8N6M5 410 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 CCDC63Q8NA47 563 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 RNF149Q8NC42 400 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 ARRDC4Q8NCT1 418 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 WNT8BQ93098 351 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 NLRP4Q96MN2 994 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 RBM15Q96T37 977 aaKnown RBP eCLIP13.07□□□□□ -0.32
AFF3-215ENST00000498090 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 C2orf40Q9H1Z8 148 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 KCNK9Q9NPC2 374 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 EURLQ9NYK6 297 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
AFF3-215ENST00000498090 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 NAALADL1Q9UQQ1 740 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
AFF3-215ENST00000498090 TCRBV5S1A1TA0A578 114 aa13.06□□□□□ -0.32
AFF3-215ENST00000498090 TCP11X1B4DZS4 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms