RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 MDH1BQ5I0G3 518 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 SLC13A5Q86YT5 568 aaPredicted RBP18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 CCDC50Q8IVM0 306 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 NIPA2Q8N8Q9 360 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 MIS12Q9H081 205 aa18.75■□□□□ 0.59
CHRNA4-206ENST00000498043 CLDN5O00501 218 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 ITGB1P05556 798 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 GLI1P08151 1106 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 MYBL2P10244 700 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 ODC1P11926 461 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 PTPN1P18031 435 aaKnown RBP18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 MTERF4Q7Z6M4 381 aaKnown RBP18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 FUKQ8N0W3 1084 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 SCLYQ96I15 445 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 SYT15Q9BQS2 421 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 SLC4A5Q9BY07 1137 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 AMACRQ9UHK6 382 aa18.74■□□□□ 0.59
CHRNA4-206ENST00000498043 ESYT3A0FGR9 886 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 INPPL1O15357 1258 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 PLEKHG4Q58EX7 1191 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 ZFYVE27Q5T4F4 411 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 TXNRD3NBQ6F5E7 133 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 OLFML1Q6UWY5 402 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 KATNAL2Q8IYT4 538 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 ZDHHC14Q8IZN3 488 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 FNIP1Q8TF40 1166 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 ACSF2Q96CM8 615 aaPredicted RBP18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 UROC1Q96N76 676 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 B3GNT5Q9BYG0 378 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 CRTAC1Q9NQ79 661 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 GABBR2O75899 941 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 LHX1P48742 406 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 FAM189BP81408 668 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 GUCY2DQ02846 1103 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 ATP13A4Q4VNC1 1196 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 NOMO2Q5JPE7 1267 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 CD300LGQ6UXG3 332 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 ZNF280BQ86YH2 543 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 SCUBE3Q8IX30 993 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 URGCPQ8TCY9 931 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 HNRNPLLQ8WVV9 542 aaKnown RBP18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 MED10Q9BTT4 135 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 HIPK3Q9H422 1215 aa18.73■□□□□ 0.59
CHRNA4-206ENST00000498043 PAPSS1O43252 624 aaPredicted RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 LRCH4O75427 683 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 ZRANB2O95218 330 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 KRT1P04264 644 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 FAM163BP0C2L3 166 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 LCP1P13796 627 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 SMC1AQ14683 1233 aaKnown RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TAF5Q15542 800 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TRNP1Q6NT89 227 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 SLC39A5Q6ZMH5 540 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TMEM110Q86TL2 294 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 PRELID2Q8N945 189 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 CLEC4CQ8WTT0 213 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 STK32AQ8WU08 396 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 RUBCNQ92622 972 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 HNRNPABQ99729 332 aaKnown RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 HERPUD2Q9BSE4 406 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 SLITRK6Q9H5Y7 841 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TET1Q8NFU7 2136 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 PI4K2BG5E9Z4 385 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 DDHD2O94830 711 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 FLT3P36888 993 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 CCL23P55773 120 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 RNASELQ05823 741 aaKnown RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 BEND6Q5SZJ8 279 aaPredicted RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 ARFGAP1Q8N6T3 406 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 DIS3LQ8TF46 1054 aaKnown RBP18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 SEPT8Q92599 483 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 EPB41L5Q9HCM4 733 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 KRT82Q9NSB4 513 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TMEM161AQ9NX61 479 aa18.72■□□□□ 0.59
CHRNA4-206ENST00000498043 TTI1O43156 1089 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 PHF2O75151 1096 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 RARAP10276 462 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 RALAP11233 206 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 GPD1P21695 349 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 SIX1Q15475 284 aaPredicted RBP18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 SMTNL2Q2TAL5 461 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 PAQR9Q6ZVX9 377 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 EXD1Q8NHP7 514 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 RSPH1Q8WYR4 309 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 RNF25Q96BH1 459 aaPredicted RBP18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 HEMGNQ9BXL5 484 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 ZWILCHQ9H900 591 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
CHRNA4-206ENST00000498043 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
CHRNA4-206ENST00000498043 C2CD4BA6NLJ0 364 aa18.7■□□□□ 0.58
CHRNA4-206ENST00000498043 BEST1O76090 585 aa18.7■□□□□ 0.58
CHRNA4-206ENST00000498043 NPR3P17342 541 aa18.7■□□□□ 0.58
CHRNA4-206ENST00000498043 PLA2G4AP47712 749 aa18.7■□□□□ 0.58
CHRNA4-206ENST00000498043 SLC6A3Q01959 620 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms