RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 FAM170BA6NMN3 283 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 MAN2B1O00754 1011 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 TRIM66O15016 1216 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 CHADO15335 359 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 VNN1O95497 513 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
NUP50-219ENST00000497960 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
NUP50-219ENST00000497960 AVPR1AP37288 418 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 PIK3CAP42336 1068 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 ENPEPQ07075 957 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 SASS6Q6UVJ0 657 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
NUP50-219ENST00000497960 TMEM150AQ86TG1 271 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 CMTM8Q8IZV2 173 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 CSGALNACT1Q8TDX6 532 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 RSPRY1Q96DX4 576 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 TRMT2BQ96GJ1 504 aaKnown RBP16.34■□□□□ 0.21
NUP50-219ENST00000497960 MYRFLQ96LU7 910 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 CEP295NLQ96MC4 621 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 TSG101Q99816 390 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 SLC46A2Q9BY10 475 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 IMPG2Q9BZV3 1241 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 SMYD3Q9H7B4 428 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
NUP50-219ENST00000497960 CETN3O15182 167 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 NCAM2O15394 837 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 CD72P21854 359 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 BMP6P22004 513 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 FCHO2Q0JRZ9 810 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ANGPT1Q15389 498 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ALYREFQ86V81 257 aaKnown RBP16.33■□□□□ 0.2
NUP50-219ENST00000497960 MON1AQ86VX9 555 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ADSSL1Q8N142 457 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 CELF5Q8N6W0 485 aaKnown RBP16.33■□□□□ 0.2
NUP50-219ENST00000497960 MAB21L3Q8N8X9 362 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 FAM86C1Q9NVL1 165 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
NUP50-219ENST00000497960 EHD2Q9NZN4 543 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
NUP50-219ENST00000497960 NCANO14594 1321 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 PRAMEF12O95522 483 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 ASS1P00966 412 aaKnown RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 GLULP15104 373 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 MAGEA9P43362 315 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 GCLMP48507 274 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 MRE11P49959 708 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 CDH8P55286 799 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 PAK1Q13153 545 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 C1orf220Q5T0J3 134 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 TXNDC8Q6A555 127 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 C8orf48Q96LL4 319 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 DLGAP2Q9P1A6 1054 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 MTF2Q9Y483 593 aaPredicted RBP16.32■□□□□ 0.2
NUP50-219ENST00000497960 PIAS3Q9Y6X2 628 aa16.32■□□□□ 0.2
NUP50-219ENST00000497960 TRIM49BA6NDI0 452 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 F8VP50 259 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 STX10O60499 249 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 LRRN2O75325 713 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 CCNE1P24864 410 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
NUP50-219ENST00000497960 GTF2H1P32780 548 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 KPNA1P52294 538 aaPredicted RBP16.31■□□□□ 0.2
NUP50-219ENST00000497960 STX1AQ16623 288 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 FAM3CQ92520 227 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 ELMO3Q96BJ8 720 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
NUP50-219ENST00000497960 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
NUP50-219ENST00000497960 C8orf33Q9H7E9 229 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms