RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MARCH5Q9NX47 278 aa15.02■□□□□ -0
VPS26A-209ENST00000497564 DDX43Q9NXZ2 648 aaKnown RBP15.02■□□□□ -0
VPS26A-209ENST00000497564 SALL4Q9UJQ4 1053 aa15.02■□□□□ -0
VPS26A-209ENST00000497564 ADAM28Q9UKQ2 775 aa15.02■□□□□ -0
VPS26A-209ENST00000497564 CDH9Q9ULB4 789 aa15.02■□□□□ -0
VPS26A-209ENST00000497564 GREB1Q4ZG55 1949 aa15.02□□□□□ -0.01
VPS26A-209ENST00000497564 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 GALTP07902 379 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 PDGFRBP09619 1106 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 PTPN1P18031 435 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 MMP8P22894 467 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 SLC11A1P49279 550 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 MRPS5P82675 430 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 ELAVL2Q12926 359 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 PTP4A2Q12974 167 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 TJAP1Q5JTD0 557 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 PPP1R26Q5T8A7 1209 aaPredicted RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 ADGRD2Q7Z7M1 963 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 DNAAF5Q86Y56 855 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 PASD1Q8IV76 773 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 C12orf29Q8N999 325 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 B3GALNT2Q8NCR0 500 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 POF1BQ8WVV4 589 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 CPA5Q8WXQ8 436 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 HLA-CQ95604 372 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 ARHGEF26Q96DR7 871 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 NOX5Q96PH1 765 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 RTP3Q9BQQ7 232 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 SYT15Q9BQS2 421 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 ACBD6Q9BR61 282 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 THAP2Q9H0W7 228 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 NSUN3Q9H649 340 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 TSPAN16Q9UKR8 245 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 FAN1Q9Y2M0 1017 aa15.01□□□□□ -0.01
VPS26A-209ENST00000497564 ZNF638Q14966 1978 aaKnown RBP15.01□□□□□ -0.01
VPS26A-209ENST00000497564 F8W810 466 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 I3L4J1 428 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 M0QYV0 167 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 HCRTO43612 131 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 TADA2AO75478 443 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 FGF18O76093 207 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 CALB1P05937 261 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 ABCB4P21439 1286 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 GPD2P43304 727 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 GSCP56915 257 aaPredicted RBP15□□□□□ -0.01
VPS26A-209ENST00000497564 HYAL1Q12794 435 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 GOLGA7BQ2TAP0 167 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 KCNT2Q6UVM3 1135 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 SYT10Q6XYQ8 523 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 SLC35F6Q8N357 371 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 HASPINQ8TF76 798 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 STK32AQ8WU08 396 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 ZNF653Q96CK0 615 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 NECAB3Q96P71 396 aaPredicted RBP15□□□□□ -0.01
VPS26A-209ENST00000497564 WDR24Q96S15 920 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 HNRNPABQ99729 332 aaKnown RBP15□□□□□ -0.01
VPS26A-209ENST00000497564 LMAN2LQ9H0V9 348 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 UBE2ZQ9H832 354 aaPredicted RBP15□□□□□ -0.01
VPS26A-209ENST00000497564 CYLDQ9NQC7 956 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 ADAM22Q9P0K1 906 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 PRG3Q9Y2Y8 225 aaPredicted RBP15□□□□□ -0.01
VPS26A-209ENST00000497564 PAXBP1Q9Y5B6 917 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 CAPN6Q9Y6Q1 641 aa15□□□□□ -0.01
VPS26A-209ENST00000497564 MYO16Q9Y6X6 1858 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 SF3B1O75533 1304 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS26A-209ENST00000497564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-209ENST00000497564 NT5C1B-RDH14C9J2C7 533 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 OAZ2O95190 189 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 MOCS3O95396 460 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 EFEMP2O95967 443 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 BMP1P13497 986 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 LAG3P18627 525 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 KCNA5P22460 613 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 SSTR3P32745 418 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-209ENST00000497564 GABRB2P47870 512 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 BCAT1P54687 386 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 BCAR1P56945 870 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 ERVFC1P60507 584 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 PLCB3Q01970 1234 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 KIAA0319Q5VV43 1072 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 OVOS1Q6IE37 1185 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 FAM171BQ6P995 826 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 TTC30AQ86WT1 665 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 TMEM173Q86WV6 379 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-209ENST00000497564 ERICH1Q86X53 443 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 THEM5Q8N1Q8 247 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 ANKRD52Q8NB46 1076 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 MSANTD4Q8NCY6 345 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 TPCN2Q8NHX9 752 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 SLC35G2Q8TBE7 412 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 ALS2CR12Q96Q35 445 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 PKMYT1Q99640 499 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
VPS26A-209ENST00000497564 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms