RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 SPOPO43791 374 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 NFICP08651 508 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC10A3P09131 477 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 PTGIRP43119 386 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ELF3P78545 371 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC10A6Q3KNW5 377 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ERMARDQ5T6L9 678 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 BHMTQ93088 406 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF510Q9Y2H8 683 aa12.18□□□□□ -0.46
SNRNP200-208ENST00000497539 CCT8L1PA6NM43 557 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 MED7O43513 233 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CALCAP01258 141 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 VTNP04004 478 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CFHP08603 1231 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 EZRP15311 586 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 AXLP30530 894 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 HUNKP57058 714 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 NKX3-2P78367 333 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 INCA1Q0VD86 236 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 DUPD1Q68J44 220 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 JADE1Q6IE81 842 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 PRELID2Q8N945 189 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM35BQ8NCS4 154 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 APBA2Q99767 749 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 EPB41L4BQ9H329 900 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 LRRC19Q9H756 370 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 VIMP08670 466 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 SMIM10L2AP0DMW4 78 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 SMIM10L2BP0DMW5 78 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 PYGMP11217 842 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 RGS2P41220 211 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 XRCC4Q13426 336 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC29A2Q14542 456 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 KBTBD12Q3ZCT8 623 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CAPRIN2Q6IMN6 1127 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 KATNAL2Q8IYT4 538 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 NLRP7Q8WX94 980 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 PRMT1Q99873 361 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 RABL2BQ9UNT1 228 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 CITO14578 2027 aa12.17□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM110-MUSTN1A8MSY1 372 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 P4HA1P13674 534 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 PTPN7P35236 360 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 CPT1AP50416 773 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 DR1Q01658 176 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 LACTB2Q53H82 288 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 FEZF2Q8TBJ5 459 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 STAMBPL1Q96FJ0 436 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ZNF317Q96PQ6 595 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 IP6K2Q9UHH9 426 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 TMEM191CA6NGB0 347 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 FOXO6A8MYZ6 492 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 PODXLO00592 558 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 CILPO75339 1184 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 TPPPO94811 219 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 CDC25CP30307 473 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 RAD23BP54727 409 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 MFSD10Q14728 455 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 LRRC14Q15048 493 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 CCDC50Q8IVM0 306 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 SMYD1Q8NB12 490 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 BTBD6Q96KE9 485 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms