RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.21
GARNL3-220ENST00000496711 FAM49AQ9H0Q0 323 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-220ENST00000496711 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
GARNL3-220ENST00000496711 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
GARNL3-220ENST00000496711 SGK1O00141 431 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 TRIM66O15016 1216 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 CST8O60676 142 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 F2P00734 622 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ABHD2P08910 425 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ZSCAN5DPP0CG00 497 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ETS1P14921 441 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 CYP3A5P20815 502 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 GPD1P21695 349 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 MIPP30301 263 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ZNF143P52747 638 aaPredicted RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 TMEM62Q0P6H9 643 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 GOLGA7BQ2TAP0 167 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 EXOC3L1Q86VI1 746 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 CHMP6Q96FZ7 201 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 C9orf72Q96LT7 481 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 TMEM121Q9BTD3 319 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 INTS9Q9NV88 658 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 GINS2Q9Y248 185 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 NRCAMQ92823 1304 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 A6NJR5 290 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 GPR32O75388 356 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 TRUB2O95900 331 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 PCK1P35558 622 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 MAGEA4P43358 317 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 YARSP54577 528 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 STAT4Q14765 748 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 PCBP1Q15365 356 aaKnown RBP eCLIP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 RNASEH2BQ5TBB1 312 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 FAM183BPQ6ZVS7 135 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 C2orf69Q8N8R5 385 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
GARNL3-220ENST00000496711 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 PTPN18Q99952 460 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 CCDC77Q9BR77 488 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 RASSF4Q9H2L5 321 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
GARNL3-220ENST00000496711 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 E5RJQ4 531 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 PECAM1P16284 738 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-220ENST00000496711 MAGEA9P43362 315 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 IRF5Q13568 498 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 GPR162Q16538 588 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 QPCTQ16769 361 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 OR6B2Q6IFH4 312 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 YTHDF3Q7Z739 585 aaKnown RBP13.69□□□□□ -0.22
GARNL3-220ENST00000496711 RFX6Q8HWS3 928 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 KCTD6Q8NC69 237 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-220ENST00000496711 HSPH1Q92598 858 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 OSMRQ99650 979 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
GARNL3-220ENST00000496711 CNPY3Q9BT09 278 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 EIF2AQ9BY44 585 aaKnown RBP13.69□□□□□ -0.22
GARNL3-220ENST00000496711 CCDC134Q9H6E4 229 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 SAYSD1Q9NPB0 183 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 CTNNAL1Q9UBT7 734 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 TUBGCP4Q9UGJ1 667 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
GARNL3-220ENST00000496711 A0A087WUV0 522 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 APOC4-APOC2K7ER74 178 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 PPEF2O14830 753 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CDH16O75309 829 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 IFNB1P01574 187 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 APOC2P02655 101 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 PFKMP08237 780 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CD48P09326 243 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 SETSIPP0DME0 302 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CYP2C9P11712 490 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 DRD4P21917 467 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 PSMC4P43686 418 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 CPLX4Q7Z7G2 160 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
GARNL3-220ENST00000496711 RIBC1Q8N443 379 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-220ENST00000496711 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms