RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SPC25Q9HBM1 224 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 SETD4Q9NVD3 440 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 AGO2Q9UKV8 859 aaKnown RBP6.53□□□□□ -1.36
SSBP1-213ENST00000496622 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
SSBP1-213ENST00000496622 UMODL1Q5DID0 1318 aa6.52□□□□□ -1.36
SSBP1-213ENST00000496622 A0A087WZ62 844 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 H3BRB1 525 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CLDN3O15551 220 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 AHCYL1O43865 530 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 MSCO60682 206 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 TADA3O75528 432 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 RNASEH2AO75792 299 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 SOX5P35711 763 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 STAT1P42224 750 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 EPHA4P54764 986 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF200P98182 395 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 AMPD2Q01433 879 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CYP24A1Q07973 514 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 FAM160B1Q5W0V3 765 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 THOC7Q6I9Y2 204 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 OSTM1Q86WC4 334 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 GPD1LQ8N335 351 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 SLC30A5Q8TAD4 765 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CPB2Q96IY4 423 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 GDAP1L1Q96MZ0 367 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 TINF2Q9BSI4 451 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 C16orf70Q9BSU1 422 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ZCWPW1Q9H0M4 648 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 FAM49AQ9H0Q0 323 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 TUT1Q9H6E5 874 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CDC23Q9UJX2 597 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ABT1Q9ULW3 272 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 MYH11P35749 1972 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 SSU72P8A0A1W2PR75 194 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF233A6NK53 670 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ASB14A6NK59 587 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 RASA4BC9J798 803 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ADCY3O60266 1144 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 FESP07332 822 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 NAMPTP43490 491 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 ACVR2BQ13705 512 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 NFIL3Q16649 462 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 KIZQ2M2Z5 673 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 TDRD10Q5VZ19 366 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 OLFML2BQ68BL8 750 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 KRT39Q6A163 491 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CPNE8Q86YQ8 564 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 GBP7Q8N8V2 638 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 C7orf57Q8NEG2 295 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 AFAP1L1Q8TED9 768 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 LMBR1Q8WVP7 490 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 PSPC1Q8WXF1 523 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 SH3KBP1Q96B97 665 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 FNBP1Q96RU3 617 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 PARK7Q99497 189 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 STK33Q9BYT3 514 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 THAP2Q9H0W7 228 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 CHST12Q9NRB3 414 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 RAB20Q9NX57 234 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 RBAKQ9NYW8 714 aaPredicted RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 XPO7Q9UIA9 1087 aaKnown RBP6.52□□□□□ -1.37
SSBP1-213ENST00000496622 GTF3C4Q9UKN8 822 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 EXOC7Q9UPT5 735 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 AKT3Q9Y243 479 aa6.52□□□□□ -1.37
SSBP1-213ENST00000496622 A0A0B4J269 797 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 A0A1B0GVG6 124 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GOLGA6L10A6NI86 522 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 P4HA2O15460 535 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 KDM1AO60341 852 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 LCA5LO95447 670 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 KRT5P13647 590 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 SCNN1AP37088 669 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 HSD17B7P56937 341 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 CRHR2Q13324 411 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GRB14Q14449 540 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 CNGA3Q16281 694 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 FAM110CQ1W6H9 321 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 DAB2IPQ5VWQ8 1189 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 CYP4F22Q6NT55 531 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 PLEKHH3Q7Z736 793 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 NOP9Q86U38 636 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 LINC00469Q8N7U9 141 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 FBXL13Q8NEE6 735 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TNIP2Q8NFZ5 429 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ZDHHC1Q8WTX9 485 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ARHGEF26Q96DR7 871 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 BTBD6Q96KE9 485 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 FBXL18Q96ME1 805 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 PNKPQ96T60 521 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 PCDHB18PQ96TA0 734 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TLR10Q9BXR5 811 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 SMARCAD1Q9H4L7 1026 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms