RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ABCB6Q9NP58 842 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 SLC39A2Q9NP94 309 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 TDP1Q9NUW8 608 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 C2orf42Q9NWW7 574 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 CGNQ9P2M7 1197 aaKnown RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 HOOK1Q9UJC3 728 aaKnown RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 USP18Q9UMW8 372 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 R3HCC1Q9Y3T6 440 aaKnown RBP15.41■□□□□ 0.06
CXCL12-208ENST00000496375 PTPRJQ12913 1337 aa15.41■□□□□ 0.06
CXCL12-208ENST00000496375 MED19A0JLT2 244 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-208ENST00000496375 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 K7ESF4 209 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 GABRDO14764 452 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 NOL4O94818 638 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 TNNC2P02585 160 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 PCSK1P29120 753 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 LHX1P48742 406 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 PNOCQ13519 176 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 SOWAHAQ2M3V2 549 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 MON1AQ86VX9 555 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 OR5B17Q8NGF7 314 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 CCDC47Q96A33 483 aaKnown RBP15.4■□□□□ 0.06
CXCL12-208ENST00000496375 GTPBP4Q9BZE4 634 aaKnown RBP15.4■□□□□ 0.06
CXCL12-208ENST00000496375 EBF3Q9H4W6 596 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 PARD6AQ9NPB6 346 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 HPS4Q9NQG7 708 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 LMBRD1Q9NUN5 540 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 INTS13Q9NVM9 706 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
CXCL12-208ENST00000496375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SOBPA7XYQ1 873 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 TADA3O75528 432 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 TGM1P22735 817 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SRSF5Q13243 272 aaKnown RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 RUNX3Q13761 415 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SIM2Q14190 667 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SURF1Q15526 300 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 KNOP1Q1ED39 458 aaKnown RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 DUOXA2Q1HG44 320 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 CFAP221Q4G0U5 840 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 LAIR1Q6GTX8 287 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 LONP2Q86WA8 852 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SPATA2LQ8IUW3 424 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SCN4BQ8IWT1 228 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 SYNPOQ8N3V7 929 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 GUF1Q8N442 669 aaKnown RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 RIN3Q8TB24 985 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 HPDLQ96IR7 371 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 RMND1Q9NWS8 449 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 UXTQ9UBK9 157 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-208ENST00000496375 PCDHA5Q9Y5H7 936 aa15.39■□□□□ 0.05
CXCL12-208ENST00000496375 OTOL1A6NHN0 477 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-208ENST00000496375 HRO43593 1189 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 KIF20AO95235 890 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 SMC2O95347 1197 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 HOXC13P31276 330 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 LMNB2Q03252 620 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 SPEM2Q0P670 501 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-208ENST00000496375 NFIL3Q16649 462 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 CC2D1AQ6P1N0 951 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-208ENST00000496375 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 FUBP3Q96I24 572 aaKnown RBP eCLIP15.38■□□□□ 0.05
CXCL12-208ENST00000496375 SYT15Q9BQS2 421 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 TRPC7Q9HCX4 862 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 AGPAT3Q9NRZ7 376 aa15.38■□□□□ 0.05
CXCL12-208ENST00000496375 ATG2BQ96BY7 2078 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 PRR5-ARHGAP8B1AHC4 643 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 PDXKO00764 312 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 ATP2C2O75185 946 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 ARSAP15289 507 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 SDHBP21912 280 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 LMO2P25791 158 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 CNR2P34972 360 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
CXCL12-208ENST00000496375 ARHGAP8P85298 464 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 GRSF1Q12849 480 aaKnown RBP eCLIP15.37■□□□□ 0.05
CXCL12-208ENST00000496375 TMEM196Q5HYL7 178 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 FSTL4Q6MZW2 842 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 PKN3Q6P5Z2 889 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 FAM171BQ6P995 826 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 HS2ST1Q7LGA3 356 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 LIMS2Q7Z4I7 341 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 WDR49Q8IV35 697 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 SLC9A9Q8IVB4 645 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 TTC16Q8NEE8 873 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 SMARCE1Q969G3 411 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms