RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 DNAI2Q9GZS0 605 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 OGDHLQ9ULD0 1010 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 KPNA7A9QM74 516 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 TULP2O00295 520 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 VDRP11473 427 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 NR1D1P20393 614 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 LRPAP1P30533 357 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 RPL21P46778 160 aaKnown RBP22.32■■□□□ 1.16
FGFR1-223ENST00000496296 CDK7P50613 346 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 NDST1P52848 882 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 SH2D3CQ8N5H7 860 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 UBLCP1Q8WVY7 318 aaPredicted RBP22.32■■□□□ 1.16
FGFR1-223ENST00000496296 TRIM7Q9C029 511 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 ELOVL4Q9GZR5 314 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 SNX24Q9Y343 169 aa22.32■■□□□ 1.16
FGFR1-223ENST00000496296 MGEA5O60502 916 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 CAPN15O75808 1086 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 SOX4Q06945 474 aaPredicted RBP22.31■■□□□ 1.16
FGFR1-223ENST00000496296 KATNAL2Q8IYT4 538 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.31■■□□□ 1.16
FGFR1-223ENST00000496296 LPPQ93052 612 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 ART4Q93070 314 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 C11orf70Q9BRQ4 267 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 TRIM31Q9BZY9 425 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 LHX5Q9H2C1 402 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 EPB41L4BQ9H329 900 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 PARVAQ9NVD7 372 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 GDAP2Q9NXN4 497 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 HMGXB4Q9UGU5 601 aa22.31■■□□□ 1.16
FGFR1-223ENST00000496296 TCRBV5S1A1TA0A578 114 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 ARL5CA6NH57 179 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 MEIS3P2A8K0S8 358 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 CALB1P05937 261 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 SGO2Q562F6 1265 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 AGMOQ6ZNB7 445 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 RHOT1Q8IXI2 618 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 ARFGAP2Q8N6H7 521 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 RNF169Q8NCN4 708 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 TWNKQ96RR1 684 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 PABPC3Q9H361 631 aaKnown RBP22.3■■□□□ 1.16
FGFR1-223ENST00000496296 RSAD1Q9HA92 442 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 GOLGA2P5Q9HBQ8 144 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 HOMER3Q9NSC5 361 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 SELPP16109 830 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 GNGT1P63211 74 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 ORC1Q13415 861 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 KCTD16Q68DU8 428 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 TRAF7Q6Q0C0 670 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 MMS22LQ6ZRQ5 1243 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 LRRC8DQ7L1W4 858 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 UNC93AQ86WB7 457 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 FAM126BQ8IXS8 530 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 CCDC105Q8IYK2 499 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 FEZF2Q8TBJ5 459 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 FBXO25Q8TCJ0 367 aa22.3■■□□□ 1.16
FGFR1-223ENST00000496296 MTRF1LQ9UGC7 380 aaKnown RBP22.3■■□□□ 1.16
FGFR1-223ENST00000496296 ECEL1O95672 775 aa22.29■■□□□ 1.16
FGFR1-223ENST00000496296 KLF1Q13351 362 aaPredicted RBP22.29■■□□□ 1.16
FGFR1-223ENST00000496296 STILQ15468 1287 aa22.29■■□□□ 1.16
FGFR1-223ENST00000496296 GSTCDQ8NEC7 633 aa22.29■■□□□ 1.16
FGFR1-223ENST00000496296 APPL2Q8NEU8 664 aa22.29■■□□□ 1.16
FGFR1-223ENST00000496296 MRPL45Q9BRJ2 306 aaKnown RBP22.29■■□□□ 1.16
FGFR1-223ENST00000496296 TSPYL2Q9H2G4 693 aaPredicted RBP22.29■■□□□ 1.16
FGFR1-223ENST00000496296 WHRNQ9P202 907 aa22.29■■□□□ 1.16
FGFR1-223ENST00000496296 HUS1O60921 280 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 PMS2P54278 862 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 PLTPP55058 493 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 CNGA2Q16280 664 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 SOWAHAQ2M3V2 549 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 OR6B3Q8NGW1 331 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 EXD1Q8NHP7 514 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 TMEM109Q9BVC6 243 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 RGS18Q9NS28 235 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 IP6K2Q9UHH9 426 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 CCDC85CA6NKD9 419 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-223ENST00000496296 LILRA4P59901 499 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 TAP1Q03518 808 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 SLMAPQ14BN4 828 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 LRRC38Q5VT99 294 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 LLGL2Q6P1M3 1020 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 DPH6Q7L8W6 267 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 ERICH1Q86X53 443 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 OR2W6PQ8NHA6 318 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 GRK7Q8WTQ7 553 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 FTHL17Q9BXU8 183 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 DCLK3Q9C098 648 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 SNX25Q9H3E2 840 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 FEZ2Q9UHY8 353 aaPredicted RBP22.28■■□□□ 1.16
FGFR1-223ENST00000496296 STRIP2Q9ULQ0 834 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.28■■□□□ 1.16
FGFR1-223ENST00000496296 ATP8A1Q9Y2Q0 1164 aa22.28■■□□□ 1.16
FGFR1-223ENST00000496296 TMEM191CA6NGB0 347 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 RPL9P32969 192 aaKnown RBP22.27■■□□□ 1.16
FGFR1-223ENST00000496296 SCNN1GP51170 649 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 PTK6Q13882 451 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 DENND1BQ6P3S1 775 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 CROCCP2Q86T23 111 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 ECHDC2Q86YB7 292 aa22.27■■□□□ 1.16
FGFR1-223ENST00000496296 TOP6BLQ8N6T0 577 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms