RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
HLA-A-208ENST00000496081 STIM2Q9P246 746 aa17.26■□□□□ 0.35
HLA-A-208ENST00000496081 I3L4J1 428 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 SART1O43290 800 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 RAD51CO43502 376 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 SEC31AO94979 1220 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 MCM3P25205 808 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 PSMA2P25787 234 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 SSR1P43307 286 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 ANKRD33Q7Z3H0 272 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 ZDHHC14Q8IZN3 488 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 FUKQ8N0W3 1084 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 PIWIL1Q96J94 861 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 HNRNPABQ99729 332 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 PLVAPQ9BX97 442 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 TET1Q8NFU7 2136 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 ENPP3O14638 875 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 B4GALT3O60512 393 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 DDHD2O94830 711 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 BRCC3P46736 316 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 RPL34P49207 117 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 MTERF4Q7Z6M4 381 aaKnown RBP17.25■□□□□ 0.35
HLA-A-208ENST00000496081 ZNF280BQ86YH2 543 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 SCUBE3Q8IX30 993 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 KATNAL2Q8IYT4 538 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 RUBCNQ92622 972 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 ARFGAP3Q9NP61 516 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 TMEM161AQ9NX61 479 aa17.25■□□□□ 0.35
HLA-A-208ENST00000496081 TCRBV7S2A1N4TA0A589 114 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ERLIN1O75477 346 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ZRANB2O95218 330 aaKnown RBP eCLIP17.24■□□□□ 0.35
HLA-A-208ENST00000496081 GLI1P08151 1106 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ODC1P11926 461 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 PAX3P23760 479 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ATP13A4Q4VNC1 1196 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 LRRC38Q5VT99 294 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 OLFML1Q6UWY5 402 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 CCNI2Q6ZMN8 369 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-208ENST00000496081 PAQR9Q6ZVX9 377 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ARFGAP1Q8N6T3 406 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 HASPINQ8TF76 798 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 ZNF333Q96JL9 665 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
HLA-A-208ENST00000496081 TSC2P49815 1807 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 GOLGA6L10A0A0M3HER8 536 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 F8W810 466 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 M0QZQ0 153 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 CLDN5O00501 218 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 FSCN2O14926 492 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 PAPSS1O43252 624 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 CYP11A1P05108 521 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 ITGB1P05556 798 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 COL6A1P12109 1028 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 GJC1P36383 396 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SNX16P57768 344 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 DSC1Q08554 894 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TCTN1Q2MV58 587 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 BEND6Q5SZJ8 279 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 RSPH1Q8WYR4 309 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SEPT8Q92599 483 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 B3GNT5Q9BYG0 378 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 ELAC1Q9H777 363 aaKnown RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SCN5AQ14524 2016 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 LRCH4O75427 683 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 MYBL2P10244 700 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 ZNF143P52747 638 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SLC6A3Q01959 620 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TAF5Q15542 800 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 COL13A1Q5TAT6 717 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TXNRD3NBQ6F5E7 133 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TRNP1Q6NT89 227 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 URGCPQ8TCY9 931 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 APBB2Q92870 758 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 KHSRPQ92945 711 aaKnown RBP eCLIP17.23■□□□□ 0.35
HLA-A-208ENST00000496081 SCLYQ96I15 445 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 HSFY1Q96LI6 401 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 RTP3Q9BQQ7 232 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 HERPUD2Q9BSE4 406 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 DUSP16Q9BY84 665 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 CYLDQ9NQC7 956 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TBC1D13Q9NVG8 400 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 AMACRQ9UHK6 382 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 CDH9Q9ULB4 789 aa17.23■□□□□ 0.35
HLA-A-208ENST00000496081 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
HLA-A-208ENST00000496081 MYBPHLA2RUH7 354 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms