RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 TACC1O75410 805 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 USP17L7P0C7H9 530 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 BDNFP23560 247 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 GRIK1P39086 918 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 TNNC1P63316 161 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 FAM160A1Q05DH4 1040 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 ZNF268Q14587 947 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 WDR72Q3MJ13 1102 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 OR6B3Q8NGW1 331 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 MYCBPAPQ8TBZ2 947 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 ZNF516Q92618 1163 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 PAGE5Q96GU1 130 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 PCED1BQ96HM7 432 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 GZF1Q9H116 711 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 EBF3Q9H4W6 596 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 HPS4Q9NQG7 708 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 EXOC1Q9NV70 894 aa18.11■□□□□ 0.49
APOBEC3A-204ENST00000495988 TRAV19A0A0A6YYK7 116 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 PHACTR2O75167 634 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 CKMP06732 381 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 PFKFB1P16118 471 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 ANXA13P27216 316 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 GNL1P36915 607 aaPredicted RBP18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 MYL6P60660 151 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 STK4Q13043 487 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 CCINQ13939 588 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 SYNPOQ8N3V7 929 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 RIN3Q8TB24 985 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 SECISBP2LQ93073 1101 aaKnown RBP18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 SPATA17Q96L03 361 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 SLC22A12Q96S37 553 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 CYP2S1Q96SQ9 504 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 SPTBN4Q9H254 2564 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 PTPRDP23468 1912 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
APOBEC3A-204ENST00000495988 A0A1B0GVL5 298 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 OTOL1A6NHN0 477 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 CLSTN1O94985 981 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 STAU1O95793 577 aaKnown RBP18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 FAM163BP0C2L3 166 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 ARSAP15289 507 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 CASP4P49662 377 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 MTF1Q14872 753 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 PDGFRLQ15198 375 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 KMT5BQ4FZB7 885 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 DENND5BQ6ZUT9 1274 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 ARL14EPQ8N8R7 260 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 KIAA0895Q8NCT3 520 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 SPATA32Q96LK8 384 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 CEP295NLQ96MC4 621 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 NXF1Q9UBU9 619 aaKnown RBP18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 NME7Q9Y5B8 376 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 ANAPC1Q9H1A4 1944 aa18.09■□□□□ 0.49
APOBEC3A-204ENST00000495988 C2orf78A6NCI8 922 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 A8MXQ7 604 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 CHURC1-FNTBB4DL54 471 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 TRIM66O15016 1216 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 CMA1P23946 247 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 ATICP31939 592 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 FNTBP49356 437 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 KRT85P78386 507 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 AMPD2Q01433 879 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 PSMD2Q13200 908 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 BIRC3Q13489 604 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 KCNB1Q14721 858 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 ZNF77Q15935 545 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 PLEKHO2Q8TD55 490 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 RMDN1Q96DB5 314 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 XYLT2Q9H1B5 865 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 DPEP3Q9H4B8 488 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 GCNT4Q9P109 453 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 USP25Q9UHP3 1055 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 RAB23Q9ULC3 237 aa18.08■□□□□ 0.48
APOBEC3A-204ENST00000495988 GPR179Q6PRD1 2367 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 LRRIQ3A6PVS8 624 aaPredicted RBP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 K7ESF4 209 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 PTPN1P18031 435 aaKnown RBP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 HDCP19113 662 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 IFNAR2P48551 515 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 AP3M2P53677 418 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 USP46P62068 366 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 FOXK2Q01167 660 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 DMWDQ09019 674 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 GRSF1Q12849 480 aaKnown RBP eCLIP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 USP4Q13107 963 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 TMEM196Q5HYL7 178 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 TDRD10Q5VZ19 366 aaKnown RBP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 HEATR6Q6AI08 1181 aaKnown RBP18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 PRR23BQ6ZRT6 265 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 ERMP1Q7Z2K6 904 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 CPA6Q8N4T0 437 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 PARD3BQ8TEW8 1205 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 OSCP1Q8WVF1 389 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 CHFRQ96EP1 664 aa18.07■□□□□ 0.48
APOBEC3A-204ENST00000495988 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms