RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FSIP1Q8NA03 581 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 CEP76Q8TAP6 659 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 FAM212AQ96EL1 285 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 PNMA5Q96PV4 448 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 FNBP1Q96RU3 617 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 SLC22A12Q96S37 553 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 PI4K2AQ9BTU6 479 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 MSTO1Q9BUK6 570 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 LINC00597Q9H2U6 94 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 DPP3Q9NY33 737 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 PILRBQ9UKJ0 227 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 ARHGAP26Q9UNA1 814 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 GPSM3Q9Y4H4 160 aa14.47□□□□□ -0.09
COL1A1-209ENST00000495677 CKMP06732 381 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 PLA2G4BP0C869 781 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-209ENST00000495677 EIF2DP41214 584 aaKnown RBP14.46□□□□□ -0.09
COL1A1-209ENST00000495677 GPR15P49685 360 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 PDE6CP51160 858 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 ZNF131P52739 623 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SIM1P81133 766 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-209ENST00000495677 GTF2BQ00403 316 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 TSPY1Q01534 308 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 DUOXA1Q1HG43 343 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 ZNF423Q2M1K9 1284 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SV2CQ496J9 727 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 KIAA1211LQ6NV74 962 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SLC39A4Q6P5W5 647 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 RAB44Q7Z6P3 723 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-209ENST00000495677 ADGRG2Q8IZP9 1017 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SPATA18Q8TC71 538 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SH3RF2Q8TEC5 729 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 WHAMMQ8TF30 809 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 LRRC15Q8TF66 581 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SPACA7Q96KW9 195 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 CEP295NLQ96MC4 621 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SLC6A14Q9UN76 642 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 STYXL1Q9Y6J8 313 aa14.46□□□□□ -0.09
COL1A1-209ENST00000495677 SPAARA0A1B0GVQ0 90 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 HNRNPLP14866 589 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 HDCP19113 662 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 PNPLA4P41247 253 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 PTGER3P43115 390 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 CDR1P51861 262 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 NEK4P51957 841 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 HMGN5P82970 282 aaKnown RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 GNL2Q13823 731 aaKnown RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 DDR2Q16832 855 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 MAP7D1Q3KQU3 841 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 SOWAHCQ53LP3 525 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 SLFN12LQ6IEE8 588 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 HDDC3Q8N4P3 179 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 IL17RCQ8NAC3 791 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 FUBP3Q96I24 572 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 PKMYT1Q99640 499 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 POLMQ9NP87 494 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 MBD1Q9UIS9 605 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-209ENST00000495677 LOC400499M0QZD8 3231 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 ITPR1Q14643 2758 aa14.45□□□□□ -0.1
COL1A1-209ENST00000495677 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 MYMKA6NI61 221 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 MAP3K13O43283 966 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 SLC26A4O43511 780 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 TRAK2O60296 914 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 SERPINF2P08697 491 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 CYP2F1P24903 491 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 MAPK8P45983 427 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 ACOT2P49753 483 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 ZXDBP98169 803 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 SLC14A1Q13336 389 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 INTS6LQ5JSJ4 861 aaKnown RBP14.44□□□□□ -0.1
COL1A1-209ENST00000495677 EOGTQ5NDL2 527 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 SDHAF4Q5VUM1 108 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 RABEPKQ7Z6M1 372 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 TMEFF1Q8IYR6 380 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 TMEM86AQ8N2M4 240 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 CHCHD4Q8N4Q1 142 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 RLN3Q8WXF3 142 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 ZNF560Q96MR9 790 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 FIZ1Q96SL8 496 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 ST6GALNAC4Q9H4F1 302 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 CAPN10Q9HC96 672 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 TRPC7Q9HCX4 862 aa14.44□□□□□ -0.1
COL1A1-209ENST00000495677 URB1O60287 2271 aaKnown RBP14.44□□□□□ -0.1
COL1A1-209ENST00000495677 NPHP3-ACAD11A0A0J9YXS1 232 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 ANTXRLA6NF34 631 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 AP5Z1O43299 807 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 OPHN1O60890 802 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 MAGEA11P43364 429 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 TNFRSF4P43489 277 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 KIR2DL1P43626 348 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 ATXN3P54252 364 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-209ENST00000495677 SEC13P55735 322 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 KCNB1Q14721 858 aa14.43□□□□□ -0.1
COL1A1-209ENST00000495677 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms