RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 NFE2Q16621 373 aaPredicted RBP12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 IFI16Q16666 785 aaKnown RBP12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 SLC35G2Q8TBE7 412 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 B3GALT6Q96L58 329 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 RNPC3Q96LT9 517 aaKnown RBP12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 TMEM209Q96SK2 561 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 CNOT8Q9UFF9 292 aaKnown RBP12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 BACE2Q9Y5Z0 518 aa12.17□□□□□ -0.46
SLC13A3-211ENST00000495082 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 CLDN5O00501 218 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 RRM1P23921 792 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 DSG1Q02413 1049 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 SHHQ15465 462 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 PLEKHA7Q6IQ23 1121 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 PMF1Q6P1K2 205 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 CLEC20AQ6ZU45 233 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 TRIM58Q8NG06 486 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 IPO4Q8TEX9 1081 aaKnown RBP12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 FUBP3Q96I24 572 aaKnown RBP eCLIP12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 HSFY1Q96LI6 401 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 MED10Q9BTT4 135 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 TMLHEQ9NVH6 421 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 MTRRQ9UBK8 725 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
SLC13A3-211ENST00000495082 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 FAM170AA1A519 330 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 RIOK3O14730 519 aaKnown RBP12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 FGF18O76093 207 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 ERBB2P04626 1255 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 UQCRHP07919 91 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 GNG11P61952 73 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 KRT17Q04695 432 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 MAMLD1Q13495 774 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 SLC8B1Q6J4K2 584 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 SYT10Q6XYQ8 523 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 GDF15Q99988 308 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 NUP85Q9BW27 656 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 SYNCQ9H7C4 482 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 ABCB6Q9NP58 842 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 PARVAQ9NVD7 372 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 CTTNBP2NLQ9P2B4 639 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 CAPN6Q9Y6Q1 641 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 SCINQ9Y6U3 715 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 VWA8A3KMH1 1905 aa12.15□□□□□ -0.46
SLC13A3-211ENST00000495082 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 TULP2O00295 520 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 BUB1O43683 1085 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 AP1G2O75843 785 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 MOCS3O95396 460 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 BMPR1AP36894 532 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 ACADSBP45954 432 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 GLUD2P49448 558 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 GPR17Q13304 367 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 SLC39A12Q504Y0 691 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 C2CD6Q53TS8 623 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 ZNF569Q5MCW4 686 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 KIAA1841Q6NSI8 718 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 PIGZQ86VD9 579 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 XYLT1Q86Y38 959 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 TPCN2Q8NHX9 752 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 SMOQ99835 787 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 PNPLA8Q9NP80 782 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 OSGEPQ9NPF4 335 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 COG5Q9UP83 839 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 CEP290O15078 2479 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 E5RJQ4 531 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 BEST1O76090 585 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 URODP06132 367 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 GTF2F1P35269 517 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLC13A3-211ENST00000495082 MAGEA11P43364 429 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms