RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 EXOSC9Q06265 439 aaKnown RBP5.48□□□□□ -1.53
CCDC66-222ENST00000494672 IQCB1Q15051 598 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 EMC10Q5UCC4 262 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 ZNF425Q6IV72 752 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 ZNF782Q6ZMW2 699 aaPredicted RBP5.48□□□□□ -1.53
CCDC66-222ENST00000494672 CATIPQ7Z7H3 387 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 ZBTB46Q86UZ6 589 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 CHMP4CQ96CF2 233 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 PAIP2Q9BPZ3 127 aaKnown RBP5.48□□□□□ -1.53
CCDC66-222ENST00000494672 PTDSS2Q9BVG9 487 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 SARS2Q9NP81 518 aaKnown RBP5.48□□□□□ -1.53
CCDC66-222ENST00000494672 SERGEFQ9UGK8 458 aa5.48□□□□□ -1.53
CCDC66-222ENST00000494672 PRR35P0CG20 571 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 KELP23276 732 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PCSK6P29122 969 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 KCNJ5P48544 419 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PXNP49023 591 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 ZNF134P52741 427 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 EEFSECP57772 596 aaKnown RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 NKX6-1P78426 367 aaPredicted RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PLS1Q14651 629 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PROSER3Q2NL68 480 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PCID2Q5JVF3 399 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 TREML2Q5T2D2 321 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 MAVSQ7Z434 540 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 PCSK9Q8NBP7 692 aaKnown RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 MTFMTQ96DP5 389 aaKnown RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 FAM210AQ96ND0 272 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 GTPBP4Q9BZE4 634 aaKnown RBP5.47□□□□□ -1.53
CCDC66-222ENST00000494672 NRIP3Q9NQ35 241 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
CCDC66-222ENST00000494672 H0YIZ8 118 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 WDHD1O75717 1129 aaPredicted RBP5.46□□□□□ -1.54
CCDC66-222ENST00000494672 DNAJB5O75953 348 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 LATS1O95835 1130 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 FAM200BP0CF97 657 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 HDCP19113 662 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 PPIFP30405 207 aaKnown RBP5.46□□□□□ -1.54
CCDC66-222ENST00000494672 PDE1AP54750 535 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 SOX8P57073 446 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 TUBA4AP68366 448 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 SSBP2P81877 361 aaPredicted RBP5.46□□□□□ -1.54
CCDC66-222ENST00000494672 LMOD3Q0VAK6 560 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 KHDC1LQ5JSQ8 128 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 RPAINQ86UA6 219 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 NGEFQ8N5V2 710 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 PMM1Q92871 262 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 ITFG2Q969R8 447 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 SLC35A4Q96G79 324 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 TMX4Q9H1E5 349 aaPredicted RBP5.46□□□□□ -1.54
CCDC66-222ENST00000494672 SERTAD3Q9UJW9 196 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 PCDHA6Q9UN73 950 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 PLEKHM1Q9Y4G2 1056 aa5.46□□□□□ -1.54
CCDC66-222ENST00000494672 CCDC194A0A1B0GVG4 234 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 DCLK1O15075 740 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 GRPP07492 148 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 IL6RP08887 468 aaPredicted RBP5.45□□□□□ -1.54
CCDC66-222ENST00000494672 LIPAP38571 399 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 LILRA4P59901 499 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 E2F2Q14209 437 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 BRDTQ58F21 947 aaPredicted RBP5.45□□□□□ -1.54
CCDC66-222ENST00000494672 ARHGAP40Q5TG30 622 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 PRAMEF17Q5VTA0 474 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
CCDC66-222ENST00000494672 LRRC71Q8N4P6 559 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 PNISRQ8TF01 805 aaKnown RBP5.45□□□□□ -1.54
CCDC66-222ENST00000494672 REPS1Q96D71 796 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 MAP3K14Q99558 947 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
CCDC66-222ENST00000494672 BHMT2Q9H2M3 363 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 TCF7L1Q9HCS4 588 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 KLHL42Q9P2K6 505 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 SYNRGQ9UMZ2 1314 aa5.45□□□□□ -1.54
CCDC66-222ENST00000494672 SMIM22K7EJ46 135 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 ZNF213O14771 459 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 UNC5CO95185 931 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 TPM2P07951 284 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 CYP2D6P10635 497 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 BDNFP23560 247 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 PEX19P40855 299 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 CLCN2P51788 898 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 NEXNQ0ZGT2 675 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 CDC37Q16543 378 aaPredicted RBP5.44□□□□□ -1.54
CCDC66-222ENST00000494672 TBC1D25Q3MII6 688 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 ZNF626Q68DY1 528 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 LSM14AQ8ND56 463 aaKnown RBP5.44□□□□□ -1.54
CCDC66-222ENST00000494672 HPS3Q969F9 1004 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
CCDC66-222ENST00000494672 C1GALT1C1Q96EU7 318 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 SENP7Q9BQF6 1050 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 AASDHPPTQ9NRN7 309 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 CNNM1Q9NRU3 951 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 DUSP22Q9NRW4 184 aa5.44□□□□□ -1.54
CCDC66-222ENST00000494672 CCNL1Q9UK58 526 aaPredicted RBP5.44□□□□□ -1.54
CCDC66-222ENST00000494672 FBXO9Q9UK97 447 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms