RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SYT1P21579 422 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 LMO2P25791 158 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 GJA4P35212 333 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 IFNAR2P48551 515 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 RBP5P82980 135 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 ZNF77Q15935 545 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 SOWAHAQ2M3V2 549 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 CBWD2Q8IUF1 395 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 TMEM86AQ8N2M4 240 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 GPD1LQ8N335 351 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 CPA6Q8N4T0 437 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 LRRC52Q8N7C0 313 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 EZH1Q92800 747 aaPredicted RBP13.55□□□□□ -0.24
SKA1-205ENST00000494518 MYLPFQ96A32 169 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 P2RY13Q9BPV8 354 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 SYT15Q9BQS2 421 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
SKA1-205ENST00000494518 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
SKA1-205ENST00000494518 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 ANTXRLA6NF34 631 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
SKA1-205ENST00000494518 DCLK1O15075 740 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 ADRB1P08588 477 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 PDGFRBP09619 1106 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 USP17L7P0C7H9 530 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 PDCP20941 246 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 PCSK1P29120 753 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 HOXA6P31267 233 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 FAM160A1Q05DH4 1040 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 USP4Q13107 963 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
SKA1-205ENST00000494518 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 C12orf50Q8NA57 414 aaPredicted RBP13.54□□□□□ -0.24
SKA1-205ENST00000494518 SH3RF2Q8TEC5 729 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 OSCP1Q8WVF1 389 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 KBTBD7Q8WVZ9 684 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 TRMT2BQ96GJ1 504 aaKnown RBP13.54□□□□□ -0.24
SKA1-205ENST00000494518 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 CRTAC1Q9NQ79 661 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 GDAP2Q9NXN4 497 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 INVSQ9Y283 1065 aa13.54□□□□□ -0.24
SKA1-205ENST00000494518 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
SKA1-205ENST00000494518 GABRDO14764 452 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 ATG13O75143 517 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 EPN2O95208 641 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 TNNC2P02585 160 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
SKA1-205ENST00000494518 DRD1P21728 446 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 BDNFP23560 247 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 PI4KAP42356 2102 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 LHX1P48742 406 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 SEC13P55735 322 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 USP46P62068 366 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 MYO1EQ12965 1108 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 ALCAMQ13740 583 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 KCNB1Q14721 858 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 EML3Q32P44 896 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 IL31Q6EBC2 164 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 TCEAL6Q6IPX3 200 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 CCDC65Q8IXS2 484 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 RDH13Q8NBN7 331 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 CD101Q93033 1021 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 TCEAL3Q969E4 200 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 MYRFLQ96LU7 910 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
SKA1-205ENST00000494518 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
SKA1-205ENST00000494518 ZNF233A6NK53 670 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 HDCP19113 662 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 HOXD13P35453 343 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 GRIK1P39086 918 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 RAP1GAPP47736 663 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 AMPD2Q01433 879 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
SKA1-205ENST00000494518 DMC1Q14565 340 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 SLC39A14Q15043 492 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 STK38Q15208 465 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 MDH1BQ5I0G3 518 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 FAM171BQ6P995 826 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 C4orf50Q6ZRC1 276 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 ATP2A3Q93084 1043 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.25
SKA1-205ENST00000494518 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 NME7Q9Y5B8 376 aa13.52□□□□□ -0.25
SKA1-205ENST00000494518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
SKA1-205ENST00000494518 CLIC2O15247 247 aa13.51□□□□□ -0.25
SKA1-205ENST00000494518 ABL1P00519 1130 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms