RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 ACTN3Q08043 901 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 NSUN2Q08J23 767 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNX13-210ENST00000494402 COX10Q12887 443 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 HABP2Q14520 560 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 DUOXA2Q1HG44 320 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 GAREM2Q75VX8 874 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 GLB1L2Q8IW92 636 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 AGGF1Q8N302 714 aaeCLIP7.32□□□□□ -1.24
SNX13-210ENST00000494402 GALNT4Q8N4A0 578 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 DCBLD1Q8N8Z6 715 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 GABPB2Q8TAK5 448 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 CPT1CQ8TCG5 803 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 ZFAND2BQ8WV99 257 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 FAM162AQ96A26 154 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 AK8Q96MA6 479 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 UROC1Q96N76 676 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 SLX1AQ9BQ83 275 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 C1orf21Q9H246 121 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 MMADHCQ9H3L0 296 aaPredicted RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 MTG2Q9H4K7 406 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 THAP9Q9H5L6 903 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 AP5S1Q9NUS5 200 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 FAM105AQ9NUU6 356 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 MCM9Q9NXL9 1143 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 CACNG4Q9UBN1 327 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 ZC3H7BQ9UGR2 993 aaKnown RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 CNOT7Q9UIV1 285 aaKnown RBP7.32□□□□□ -1.24
SNX13-210ENST00000494402 ANGPTL3Q9Y5C1 460 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 ACTL7BQ9Y614 415 aa7.32□□□□□ -1.24
SNX13-210ENST00000494402 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 CCDC151A5D8V7 595 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 H0YAE9 185 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 STX16-NPEPL1H3BU86 382 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 STX16O14662 325 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 WDR46O15213 610 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 KLK10O43240 276 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 PRPSAP2O60256 369 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 GUCY1B2O75343 617 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 AHSGP02765 367 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SFTPCP11686 197 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 NFKBIAP25963 317 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 HARS2P49590 506 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 TKTL1P51854 596 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 NRG3P56975 720 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 KLHL30Q0D2K2 578 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 CAMK1Q14012 370 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 NAA25Q14CX7 972 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 RPS6KA2Q15349 733 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SLC5A9Q2M3M2 681 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SMU1Q2TAY7 513 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 PRICKLE4Q2TBC4 344 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 ERMARDQ5T6L9 678 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 MROH9Q5TGP6 573 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 MTFR2Q6P444 385 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 OTUD6AQ7L8S5 288 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 ZER1Q7Z7L7 766 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 RALYLQ86SE5 291 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 GPR149Q86SP6 731 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 FAM90A1Q86YD7 464 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 LINC00116Q8NCU8 138 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 IPMKQ8NFU5 416 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 IFI44Q8TCB0 444 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 STAMQ92783 540 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 CHFRQ96EP1 664 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SIPA1Q96FS4 1042 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 PPP1R13BQ96KQ4 1090 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 CDADC1Q9BWV3 514 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 TEX13BQ9BXU2 312 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 FUT8Q9BYC5 575 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 RNF208Q9H0X6 261 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 SLC25A18Q9H1K4 315 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 RANBP17Q9H2T7 1088 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 VEZTQ9HBM0 779 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 FANCFQ9NPI8 374 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 NXF1Q9UBU9 619 aaKnown RBP7.31□□□□□ -1.24
SNX13-210ENST00000494402 WASF3Q9UPY6 502 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 KIF3AQ9Y496 699 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 AP1M2Q9Y6Q5 423 aa7.31□□□□□ -1.24
SNX13-210ENST00000494402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 PRAMEF22A3QJZ6 481 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 A8MV72 311 aaPredicted RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 PCDH17O14917 1159 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 MUSKO15146 869 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 DYRK3O43781 588 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 RASSF9O75901 435 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 C6P13671 934 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CPA1P15085 419 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 PTPN2P17706 415 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 BSGP35613 385 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 CAPZA2P47755 286 aa7.3□□□□□ -1.24
SNX13-210ENST00000494402 RBM5P52756 815 aaKnown RBP eCLIP7.3□□□□□ -1.24
SNX13-210ENST00000494402 EXOSC9Q06265 439 aaKnown RBP7.3□□□□□ -1.24
SNX13-210ENST00000494402 DDR1Q08345 913 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms