RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 EMC7Q9NPA0 242 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 SETD4Q9NVD3 440 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 RTEL1Q9NZ71 1219 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 FAN1Q9Y2M0 1017 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 PCDHA1Q9Y5I3 950 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 CCDC171Q6TFL3 1326 aa5.93□□□□□ -1.46
PTCD3-219ENST00000494323 MICAL3Q7RTP6 2002 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TCRBV5S2A0A599 114 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 C17orf102A2RUQ5 167 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 KLRF2D3W0D1 207 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 K7ESF4 209 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 GABRDO14764 452 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CLASP2O75122 1294 aaKnown RBP5.92□□□□□ -1.46
PTCD3-219ENST00000494323 HIP1RO75146 1068 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 PRKD3O94806 890 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CSPG5O95196 566 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 KRT1P04264 644 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 PCP11498 1178 aaKnown RBP5.92□□□□□ -1.46
PTCD3-219ENST00000494323 GLDCP23378 1020 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CFPP27918 469 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 HSD17B4P51659 736 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 NEK2P51955 445 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 HTRA4P83105 476 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-219ENST00000494323 OCRLQ01968 901 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TUSC3Q13454 348 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 PGM5Q15124 567 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CLUL1Q15846 466 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 ASPRV1Q53RT3 343 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CCDC178Q5BJE1 867 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TCEAL5Q5H9L2 206 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 FSTL4Q6MZW2 842 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 SPOCD1Q6ZMY3 1216 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 ATG14Q6ZNE5 492 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 STOX1Q6ZVD7 989 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TMC6Q7Z403 805 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 SERINC5Q86VE9 423 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CILP2Q8IUL8 1156 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 LRRC56Q8IYG6 542 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CNTD1Q8N815 330 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 IL31RAQ8NI17 732 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 NEK9Q8TD19 979 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CHTF18Q8WVB6 975 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 PIBF1Q8WXW3 757 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 KCNN1Q92952 543 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TOP1MTQ969P6 601 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 MRPL38Q96DV4 380 aaKnown RBP5.92□□□□□ -1.46
PTCD3-219ENST00000494323 YME1L1Q96TA2 773 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 AMNQ9BXJ7 453 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 CD244Q9BZW8 370 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TRHDEQ9UKU6 1024 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TELO2Q9Y4R8 837 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 TANC1Q9C0D5 1861 aa5.92□□□□□ -1.46
PTCD3-219ENST00000494323 SIP14410 1827 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 NPIPB6E9PJ23 425 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 H3BNC9 293 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ETV2O00321 342 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ZBTB5O15062 677 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SMIM10L2AP0DMW4 78 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SMIM10L2BP0DMW5 78 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 TGFB3P10600 412 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ALADP13716 330 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 UBA1P22314 1058 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 VIPR1P32241 457 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 IL2P60568 153 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 IRF9Q00978 393 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SP4Q02446 784 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 DLX2Q07687 328 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SLC35G1Q2M3R5 365 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 IFIT1BQ5T764 474 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 UTP14CQ5TAP6 766 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 KCNV1Q6PIU1 500 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 CYB5R4Q7L1T6 521 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ZNF605Q86T29 641 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 NOSTRINQ8IVI9 506 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 CBARPQ8N350 705 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SEPT8Q92599 483 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ALG3Q92685 438 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 IL17RAQ96F46 866 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SCYL1Q96KG9 808 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 PIGSQ96S52 555 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 SMAD5Q99717 465 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 UBAC1Q9BSL1 405 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 IFIH1Q9BYX4 1025 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 MAF1Q9H063 256 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 THG1LQ9NWX6 298 aaKnown RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 H2AFY2Q9P0M6 372 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 CTNNA3Q9UI47 895 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 MAD2L2Q9UI95 211 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 ZMYM6O95789 1325 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 EMSYQ7Z589 1322 aa5.91□□□□□ -1.46
PTCD3-219ENST00000494323 COL4A4P53420 1690 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-219ENST00000494323 DOCK5Q9H7D0 1870 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 GCOM1H8Y6P7 765 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 GRM6O15303 877 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 DCXO43602 365 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 IGHDP01880 384 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms