RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ZNF551Q7Z340 670 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 WDR53Q7Z5U6 358 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 GPR149Q86SP6 731 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SLC15A3Q8IY34 581 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 YAF2Q8IY57 180 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 KRT78Q8N1N4 520 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SLC15A4Q8N697 577 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 DNAJC5GQ8N7S2 189 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 Q8NA96 180 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 BEND2Q8NDZ0 799 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 NACC2Q96BF6 587 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 LRIG1Q96JA1 1093 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SLC46A1Q96NT5 459 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 PTDSS2Q9BVG9 487 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SPATA5L1Q9BVQ7 753 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 APOL5Q9BWW9 433 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 DPH1Q9BZG8 443 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 TTYH3Q9C0H2 523 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SCAND2PQ9GZW5 306 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 BTBD1Q9H0C5 482 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 GLOD4Q9HC38 313 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 ALG13Q9NP73 1137 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SACM1LQ9NTJ5 587 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 MRPS18AQ9NVS2 196 aaKnown RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 TFCP2L1Q9NZI6 479 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 VSX1Q9NZR4 365 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 C11orf21Q9P2W6 132 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 XPR1Q9UBH6 696 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CPNE7Q9UBL6 633 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 DKK2Q9UBU2 259 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 CCNL1Q9UK58 526 aaPredicted RBP2.88□□□□□ -1.95
LMNB1-207ENST00000494185 SNX13Q9Y5W8 968 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 USP19O94966 1318 aa2.88□□□□□ -1.95
LMNB1-207ENST00000494185 A0A087WWL8 130 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 GRID2IPA4D2P6 1211 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 TRIM43BA6NCK2 446 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 RHPN2P1A8MT19 583 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 QSOX1O00391 747 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 PMM2O15305 246 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 RASSF9O75901 435 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SLPIP03973 132 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 IFIT2P09913 472 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 PPP3CBP16298 524 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 ZFXP17010 805 aaPredicted RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 PDE6CP51160 858 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 CACNA2D1P54289 1103 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 FMO1Q01740 532 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 IFIT5Q13325 482 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 CTBP1Q13363 440 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 HSP90AB4PQ58FF6 505 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 CERCAMQ5T4B2 595 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 ANKRD16Q6P6B7 361 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 VWA1Q6PCB0 445 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 TMEM108Q6UXF1 575 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SLC29A4Q7RTT9 530 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 TMPRSS9Q7Z410 1059 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 DNAJC10Q8IXB1 793 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SPICE1Q8N0Z3 855 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 PHKBQ93100 1093 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SPSB4Q96A44 273 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 TRIM43Q96BQ3 446 aaPredicted RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 NMD3Q96D46 503 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 ZC3H10Q96K80 434 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 UROC1Q96N76 676 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 STRBPQ96SI9 672 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 DPCDQ9BVM2 203 aaPredicted RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 EIF2AQ9BY44 585 aaKnown RBP2.87□□□□□ -1.95
LMNB1-207ENST00000494185 FAM83DQ9H4H8 585 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SMURF2Q9HAU4 748 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SNX15Q9NRS6 342 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 SYBUQ9NX95 663 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 STK32BQ9NY57 414 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 HDAC9Q9UKV0 1011 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 MAFFQ9ULX9 164 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 WNT6Q9Y6F9 365 aa2.87□□□□□ -1.95
LMNB1-207ENST00000494185 LOC102723971A0A1B0GUV8 181 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 HMGB1P1B2RPK0 211 aaPredicted RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 APAF1O14727 1248 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 THAP12O43422 761 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 SUV39H1O43463 412 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 RGS10O43665 173 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 PROP1O75360 226 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 CHRM2P08172 466 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 NPSP0C0P6 89 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 EBLN1P0CF75 366 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 CD19P15391 556 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 BMP5P22003 454 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 GATA3P23771 443 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 EPHA3P29320 983 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 TOB1P50616 345 aaPredicted RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 LILRA4P59901 499 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 RPS16P62249 146 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 BOP1Q14137 746 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF169Q14929 603 aaPredicted RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 KRT72Q14CN4 511 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ZRSR2Q15696 482 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 CERKLQ49MI3 558 aaPredicted RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 C3orf38Q5JPI3 329 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ARHGAP40Q5TG30 622 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 IGFL4Q6B9Z1 124 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms