RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 EFTUD2Q15029 972 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL25A1-204ENST00000494183 TFDP3Q5H9I0 405 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 MDH1BQ5I0G3 518 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 MROH9Q5TGP6 573 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
COL25A1-204ENST00000494183 ELMO2Q96JJ3 720 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 VIPAS39Q9H9C1 493 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 ANGPTL2Q9UKU9 493 aa12.17□□□□□ -0.46
COL25A1-204ENST00000494183 TMCC1O94876 653 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 LUC7L3O95232 432 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 KRT4P19013 534 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 ATICP31939 592 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 NDST1P52848 882 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 EFEMP1Q12805 493 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 FSCN1Q16658 493 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 SLFN11Q7Z7L1 901 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 RIOX2Q8IUF8 465 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 GRAMD1AQ96CP6 724 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 ASB7Q9H672 318 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 RNF19AQ9NV58 838 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 SERPINB9P50453 376 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 PHEXP78562 749 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 STX3Q13277 289 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 DGKZQ13574 1117 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 IQSEC1Q6DN90 963 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 OVOS1Q6IE37 1185 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 MFN1Q8IWA4 741 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 TRIM17Q9Y577 477 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 SMAPO00193 183 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 PROSCO94903 275 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 ENDOD1O94919 500 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 LGALS2P05162 132 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 RAG1P15918 1043 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 TKTL1P51854 596 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 SLC12A3P55017 1021 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 PPIL2Q13356 520 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 PTRHD1Q6GMV3 140 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
COL25A1-204ENST00000494183 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 USP18Q9UMW8 372 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
COL25A1-204ENST00000494183 CCDC22O60826 627 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SPAG6O75602 509 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 PSMD10O75832 226 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 URODP06132 367 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 ERFP50548 548 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 E2F4Q16254 413 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM259Q4ZIN3 620 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 C1orf186Q6ZWK4 172 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 STAMBPL1Q96FJ0 436 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 BARX2Q9UMQ3 279 aaPredicted RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 CALML6Q8TD86 181 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SYT15Q9BQS2 421 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 RNF208Q9H0X6 261 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SLC39A10Q9ULF5 831 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 PCDHGB4Q9UN71 923 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 TMEM120BA0PK00 339 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 H7C4K7 107 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 MYO1CO00159 1063 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 STX7O15400 261 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 CHRM3P20309 590 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 HMOX2P30519 316 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 PSEN2P49810 448 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 ESRRGP62508 458 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 KDSRQ06136 332 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 RBBP7Q16576 425 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SPATA21Q7Z572 469 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 LRRC6Q86X45 466 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 TSPAN17Q96FV3 270 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 MRPL46Q9H2W6 279 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 XAB2Q9HCS7 855 aaKnown RBP12.15□□□□□ -0.46
COL25A1-204ENST00000494183 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 AP4E1Q9UPM8 1137 aa12.15□□□□□ -0.46
COL25A1-204ENST00000494183 SLC12A8A0AV02 714 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms