RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TSPAN16Q9UKR8 245 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 CAPN11Q9UMQ6 739 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 LUC7L2Q9Y383 392 aaKnown RBP15.44■□□□□ 0.06
BRCA1-223ENST00000494123 TRIM66O15016 1216 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 SOAT2O75908 522 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 GYPCP04921 128 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 FERP16591 822 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 CASP14P31944 242 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 TWF1Q12792 350 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 ELMOD1Q8N336 334 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 TFAP2BQ92481 460 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 NUCKS1Q9H1E3 243 aaKnown RBP15.43■□□□□ 0.06
BRCA1-223ENST00000494123 ZDHHC7Q9NXF8 308 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 O00370 1275 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 RFPL2O75678 378 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 HNRNPA1P09651 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRCA1-223ENST00000494123 CYP11B1P15538 503 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 KRT9P35527 623 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 EPHB3P54753 998 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 ZBED6P86452 979 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 VEPH1Q14D04 833 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 CNGA2Q16280 664 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 DDR2Q16832 855 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 CTC1Q2NKJ3 1217 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 ANKRD54Q6NXT1 300 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 LCLAT1Q6UWP7 414 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 PAQR9Q6ZVX9 377 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 MAFAQ8NHW3 353 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-223ENST00000494123 ZNF606Q8WXB4 792 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 PDCL3Q9H2J4 239 aa15.43■□□□□ 0.06
BRCA1-223ENST00000494123 DMAP1Q9NPF5 467 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-223ENST00000494123 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRCA1-223ENST00000494123 CCDC195A0A1B0GUA6 201 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 F8VP50 259 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 M0QYV0 167 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 CCL16O15467 120 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 XYLBO75191 536 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 TBX10O75333 385 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 NPR3P17342 541 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 HOXB8P17481 243 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-223ENST00000494123 HOXA9P31269 272 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 SSTR3P32745 418 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-223ENST00000494123 BCAT1P54687 386 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 MAP3K7CLP57077 242 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 GSE1Q14687 1217 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 COL19A1Q14993 1142 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 TAF12Q16514 161 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 ASIC2Q16515 512 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 RARS2Q5T160 578 aaKnown RBP15.42■□□□□ 0.06
BRCA1-223ENST00000494123 C12orf76Q8N812 135 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-223ENST00000494123 ANKRD52Q8NB46 1076 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 DUSP16Q9BY84 665 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 PIDD1Q9HB75 910 aa15.42■□□□□ 0.06
BRCA1-223ENST00000494123 MICAL2O94851 1124 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 ATF6P18850 670 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 GPR15P49685 360 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 CACNA2D1P54289 1103 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 BST2Q10589 180 aaKnown RBP15.41■□□□□ 0.06
BRCA1-223ENST00000494123 SDHAF4Q5VUM1 108 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 TAF3Q5VWG9 929 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 CLEC20AQ6ZU45 233 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 ITIH5Q86UX2 942 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 UBA3Q8TBC4 463 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 GIPC2Q8TF65 315 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 C8orf48Q96LL4 319 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 KCNK16Q96T55 309 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 ZSWIM1Q9BR11 485 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 APOL5Q9BWW9 433 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 PRKD2Q9BZL6 878 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-223ENST00000494123 CLEC1BQ9P126 229 aa15.41■□□□□ 0.06
BRCA1-223ENST00000494123 CDC25BP30305 580 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 MRE11P49959 708 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-223ENST00000494123 TSR1Q2NL82 804 aaKnown RBP15.4■□□□□ 0.06
BRCA1-223ENST00000494123 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 NOP9Q86U38 636 aaKnown RBP15.4■□□□□ 0.06
BRCA1-223ENST00000494123 TTC30AQ86WT1 665 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 CNGA4Q8IV77 575 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 CMASQ8NFW8 434 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-223ENST00000494123 GPR152Q8TDT2 470 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 EPS8L1Q8TE68 723 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 HLA-CQ95604 372 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 ZNF512Q96ME7 567 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-223ENST00000494123 SMOQ99835 787 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 CSNK1G1Q9HCP0 422 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 AIPL1Q9NZN9 384 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 ASB3Q9Y575 518 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 CEP83Q9Y592 693 aa15.4■□□□□ 0.06
BRCA1-223ENST00000494123 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 AKR1B15C9JRZ8 316 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 BEST1O76090 585 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SETSIPP0DME0 302 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 KCNA5P22460 613 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 LTBRP36941 435 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PDE4CQ08493 712 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CLUL1Q15846 466 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms