RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CNTNAP2Q9UHC6 1331 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 APOC4-APOC2K7ER74 178 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 C2CD2LO14523 706 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 B4GALT4O60513 344 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 EDF1O60869 148 aaKnown RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 RNF8O76064 485 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 APOC2P02655 101 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CA4P22748 312 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PCK1P35558 622 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CDKN2BP42772 138 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 TAZQ16635 292 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 FAM133BQ5BKY9 247 aaKnown RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 WASHC2DQ5SRD0 308 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 APBB1IPQ7Z5R6 666 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 CHSY1Q86X52 802 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 TEX9Q8N6V9 391 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ZSWIM2Q8NEG5 633 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 MGARPQ8TDB4 240 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PYROXD1Q8WU10 500 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 USP6NLQ92738 828 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CYTH2Q99418 400 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 NFKBIZQ9BYH8 718 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CXorf56Q9H5V9 222 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 VPS37BQ9H9H4 285 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ASNSD1Q9NWL6 643 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 CPA4Q9UI42 421 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 POLIQ9UNA4 740 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 C15orf41Q9Y2V0 281 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 TCRBV5S1A1TA0A578 114 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 LRRD1A4D1F6 860 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 SGK1O00141 431 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ATP2C2O75185 946 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CYP2C8P10632 490 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PECAM1P16284 738 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 TAS2R40P59535 323 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 TARBP2Q15633 366 aaKnown RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 TBCCQ15814 346 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ADGRD1Q6QNK2 874 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 TBC1D1Q86TI0 1168 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 DENND1AQ8TEH3 1009 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PRCCQ92733 491 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 MCEEQ96PE7 176 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 FAM96AQ9H5X1 160 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 VRTNQ9H8Y1 702 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ACP6Q9NPH0 428 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 CISHQ9NSE2 258 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 ANKFY1Q9P2R3 1169 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 DNPEPQ9ULA0 475 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 PHTF1Q9UMS5 762 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
RFC4-214ENST00000494047 R3HDM2Q9Y2K5 976 aaKnown RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
RFC4-214ENST00000494047 KLF11O14901 512 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 PPP1R12AO14974 1030 aaPredicted RBP12.04□□□□□ -0.48
RFC4-214ENST00000494047 CHADO15335 359 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 HMGCRP04035 888 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 ERBB2P04626 1255 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 KRT3P12035 628 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 CD58P19256 250 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 PSMA2P25787 234 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 RGS19P49795 217 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 FCGRTP55899 365 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 PLCB3Q01970 1234 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 LRRC14Q15048 493 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 FAM110CQ1W6H9 321 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 FAM91A1Q658Y4 838 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 MPZL3Q6UWV2 235 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 ZBED8Q8IZ13 594 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 SEPT1Q8WYJ6 367 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 MTBPQ96DY7 904 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 C9orf72Q96LT7 481 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 TBCBQ99426 244 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 DHRS4Q9BTZ2 278 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 MMADHCQ9H3L0 296 aaPredicted RBP12.04□□□□□ -0.48
RFC4-214ENST00000494047 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
RFC4-214ENST00000494047 MKS1Q9NXB0 559 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 NUB1Q9Y5A7 615 aa12.04□□□□□ -0.48
RFC4-214ENST00000494047 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 TMEM150BA6NC51 233 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 TYROBPO43914 113 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 RGS20O76081 388 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 STAU1O95793 577 aaKnown RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 SETSIPP0DME0 302 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms